PRIDE: Quality control in a proteomics data repository

by Csordas, Attila, Ovelleiro, David, Wang, Rui, Foster, Joseph M., Ríos, Daniel, Vizcaíno, Juan Antonio, Hermjakob, Henning
Published 2012

From Peptidome to PRIDE: Public proteomics data migration at a large scale

by Csordas, Attila, Wang, Rui, Ríos, Daniel, Reisinger, Florian, Foster, Joseph M, Slotta, Douglas J, Vizcaíno, Juan Antonio, Hermjakob, Henning
Published 2013

LipidHome: A Database of Theoretical Lipids Optimized for High Throughput Mass Spectrometry Lipidomics

by Foster, Joseph M., Moreno, Pablo, Fabregat, Antonio, Hermjakob, Henning, Steinbeck, Christoph, Apweiler, Rolf, Wakelam, Michael J. O., Vizcaíno, Juan Antonio
Published 2013

PRIDE Inspector: a tool to visualize and validate MS proteomics data

by Wang, Rui, Fabregat, Antonio, Ríos, Daniel, Ovelleiro, David, Foster, Joseph M., Côté, Richard G., Griss, Johannes, Csordas, Attila, Perez-Riverol, Yasset, Reisinger, Florian, Hermjakob, Henning, Martens, Lennart, Vizcaíno, Juan Antonio
Published 2012

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

by Vizcaíno, Juan Antonio, Côté, Richard G., Csordas, Attila, Dianes, José A., Fabregat, Antonio, Foster, Joseph M., Griss, Johannes, Alpi, Emanuele, Birim, Melih, Contell, Javier, O’Kelly, Gavin, Schoenegger, Andreas, Ovelleiro, David, Pérez-Riverol, Yasset, Reisinger, Florian, Ríos, Daniel, Wang, Rui, Hermjakob, Henning
Published 2013

Genomic complexity of urothelial bladder cancer revealed in urinary cfDNA

by Togneri, Fiona S, Ward, Douglas G, Foster, Joseph M, Devall, Adam J, Wojtowicz, Paula, Alyas, Sofia, Vasques, Fabiana Ramos, Oumie, Assa, James, Nicholas D, Cheng, K K, Zeegers, Maurice P, Deshmukh, Nayneeta, O'Sullivan, Brendan, Taniere, Philippe, Spink, Karen G, McMullan, Dominic J, Griffiths, Mike, Bryan, Richard T
Published 2016

HER2 overexpression and amplification as a potential therapeutic target in colorectal cancer: analysis of 3256 patients enrolled in the QUASAR, FOCUS and PICCOLO colorectal cancer...

by Richman, Susan D, Southward, Katie, Chambers, Philip, Cross, Debra, Barrett, Jennifer, Hemmings, Gemma, Taylor, Morag, Wood, Henry, Hutchins, Gordon, Foster, Joseph M, Oumie, Assa, Spink, Karen G, Brown, Sarah R, Jones, Marc, Kerr, David, Handley, Kelly, Gray, Richard, Seymour, Matthew, Quirke, Philip
Published 2016

Cross-laboratory validation of the OncoScan® FFPE Assay, a multiplex tool for whole genome tumour profiling

by Foster, Joseph M, Oumie, Assa, Togneri, Fiona S, Vasques, Fabiana Ramos, Hau, Debra, Taylor, Morag, Tinkler-Hundal, Emma, Southward, Katie, Medlow, Paul, McGreeghan-Crosby, Keith, Halfpenny, Iris, McMullan, Dominic J, Quirke, Phil, Keating, Katherine E, Griffiths, Mike, Spink, Karen G, Brew, Fiona
Published 2015