An evaluation of two-channel ChIP-on-chip and DNA methylation microarray normalization strategies

by Adriaens, Michiel E, Jaillard, Magali, Eijssen, Lars MT, Mayer, Claus-Dieter, Evelo, Chris TA
Published 2012

Molecular Pathways Involved in Prostate Carcinogenesis: Insights from Public Microarray Datasets

by Baetke, Sarah C., Adriaens, Michiel E., Seigneuric, Renaud, Evelo, Chris T., Eijssen, Lars M. T.
Published 2012

A user-friendly workflow for analysis of Illumina gene expression bead array data available at the arrayanalysis.org portal

by Eijssen, Lars M.T., Goelela, Varshna S., Kelder, Thomas, Adriaens, Michiel E., Evelo, Chris T., Radonjic, Marijana
Published 2015

User-friendly solutions for microarray quality control and pre-processing on ArrayAnalysis.org

by Eijssen, Lars M. T., Jaillard, Magali, Adriaens, Michiel E., Gaj, Stan, de Groot, Philip J., Müller, Michael, Evelo, Chris T.
Published 2013

MK3 controls Polycomb target gene expression via negative feedback on ERK

by Prickaerts, Peggy, Niessen, Hanneke EC, Mouchel-Vielh, Emmanuèle, Dahlmans, Vivian EH, van den Akker, Guus GH, Geijselaers, Claudia, Adriaens, Michiel E, Spaapen, Frank, Takihara, Yoshihiro, Rapp, Ulf R, Peronnet, Frédérique, Voncken, Jan Willem
Published 2012

Genome-Wide Identification of Expression Quantitative Trait Loci (eQTLs) in Human Heart

by Koopmann, Tamara T., Adriaens, Michiel E., Moerland, Perry D., Marsman, Roos F., Westerveld, Margriet L., Lal, Sean, Zhang, Taifang, Simmons, Christine Q., Baczko, Istvan, dos Remedios, Cristobal, Bishopric, Nanette H., Varro, Andras, George, Alfred L., Lodder, Elisabeth M., Bezzina, Connie R.
Published 2014

Quantitative analysis of ChIP-seq data uncovers dynamic and sustained H3K4me3 and H3K27me3 modulation in cancer cells under hypoxia

by Adriaens, Michiel E., Prickaerts, Peggy, Chan-Seng-Yue, Michelle, van den Beucken, Twan, Dahlmans, Vivian E. H., Eijssen, Lars M., Beck, Timothy, Wouters, Bradly G., Voncken, Jan Willem, Evelo, Chris T. A.
Published 2016

Hypoxia increases genome-wide bivalent epigenetic marking by specific gain of H3K27me3

by Prickaerts, Peggy, Adriaens, Michiel E., Beucken, Twan van den, Koch, Elizabeth, Dubois, Ludwig, Dahlmans, Vivian E. H., Gits, Caroline, Evelo, Chris T. A., Chan-Seng-Yue, Michelle, Wouters, Bradly G., Voncken, Jan Willem
Published 2016

Genome-wide association study of multiple congenital heart disease phenotypes identifies a susceptibility locus for atrial septal defect at chromosome 4p16

by Cordell, Heather J., Bentham, Jamie, Topf, Ana, Zelenika, Diana, Heath, Simon, Mamasoula, Chrysovalanto, Cosgrove, Catherine, Blue, Gillian, Granados-Riveron, Javier, Setchfield, Kerry, Thornborough, Chris, Breckpot, Jeroen, Soemedi, Rachel, Martin, Ruairidh, Rahman, Thahira J., Hall, Darroch, van Engelen, Klaartje, Moorman, Antoon F.M., Zwinderman, Aelko H, Barnett, Phil, Koopmann, Tamara T., Adriaens, Michiel E., Varro, Andras, George, Alfred L., dos Remedios, Christobal, Bishopric, Nanette H., Bezzina, Connie R., O’Sullivan, John, Gewillig, Marc, Bu’Lock, Frances A., Winlaw, David, Bhattacharya, Shoumo, Devriendt, Koen, Brook, J. David, Mulder, Barbara J.M., Mital, Seema, Postma, Alex V., Lathrop, G. Mark, Farrall, Martin, Goodship, Judith A., Keavney, Bernard D.
Published 2013