The first genome assembly of fungal pathogen Pyrenophora tritici-repentis race 1 isolate using Oxford Nanopore MinION sequencing

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The first genome assembly of fungal pathogen Pyrenophora tritici-repentis race 1 isolate using Oxford Nanopore MinION sequencing

Objectives: The assembly of fungal genomes using short-reads is challenged by long repetitive and low GC regions. However, long-read sequencing technologies, such as PacBio and Oxford Nanopore, are able to overcome many problematic regions, thereby providing an opportunity to improve fragmented geno...

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Bibliographic Details
Main Authors:	Moolhuijzen, Paula, See, Pao Theen, Moffat, Caroline
Format:	Journal Article
Language:	English
Published:	2021
Subjects:	Comparative analysis Genome assembly MinION Oxford Nanopore Pyrenophora tritici-repentis Tan spot ToxA Yellow spot Ascomycota Genome, Fungal High-Throughput Nucleotide Sequencing Nanopores
Online Access:	http://hdl.handle.net/20.500.11937/87625

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