Optimal probe length varies for targets with high sequence variation: Implications for probe library design for resequencing highly variable genes
© 2008 Haslam et al. Background: Sequencing by hybridisation is an effective method for obtaining large amounts of DNA sequence information at low cost. The efficiency of SBH depends on the design of the probe library to provide the maximum information for minimum cost. Long probes provide a high...
| Main Authors: | Haslam, N.J., Whiteford, N.E., Weber, G., Prügel-Bennett, A., Essex, J.W., Neylon, Cameron |
|---|---|
| Other Authors: | Hall, Neil |
| Format: | Journal Article |
| Language: | English |
| Published: |
PUBLIC LIBRARY SCIENCE
2008
|
| Subjects: | |
| Online Access: | http://hdl.handle.net/20.500.11937/81469 |
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