Phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences
Phylogenetic relationships among Malaysian pig-tailed macaques have never been established even though the data are crucial in aiding conservation plan for the species. The aims of this study is to establish the phylogenetic relationships of Macaca nemestrina in Malaysia. A total of 21 genetic sampl...
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2014
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| Online Access: | http://dx.doi.org/10.1063/1.4895300 http://dx.doi.org/10.1063/1.4895300 |
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uthm-9801 |
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eprints |
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uthm-98012018-08-13T03:32:38Z Phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences M. A. B., Abdul-Latif Ampeng, A Md Zain, Badrul Munir QP Physiology Phylogenetic relationships among Malaysian pig-tailed macaques have never been established even though the data are crucial in aiding conservation plan for the species. The aims of this study is to establish the phylogenetic relationships of Macaca nemestrina in Malaysia. A total of 21 genetic samples of M. nemestrina yielding 458 bp of Dloop sequences were used in phylogenetic analyses, in addition to one sample of M. fascicularis which was used as an outgroup. Sequence character analysis revealed that D-loop locus contains 23% parsimony informative character detected among the ingroups. Further analysis indicated a clear separation between populations originating from different regions; the Malay Peninsula populations are separated from Borneo Insular population; and Perak population formed a distinctive clade within Peninsular Malaysia populations. Phylogenetic trees (NJ, MP and Bayesian) portray a consistent clustering paradigm as Borneo population was distinguished from Peninsula population (100% bootstrap value in theNJ, MP, 1.00 posterior probability in Bayesian trees). Perak’s population was separated from other Peninsula populations (100% in NJ, 99% in MP and1.00 in Bayesian). D-loop region of mtDNA is proven to be a suitable locus in studying the separation of M. nemestrina at population level. These findings are crucial in aiding the conservation management and translocation process of M. fascicularis populations in Malaysia. 2014 Conference or Workshop Item PeerReviewed http://dx.doi.org/10.1063/1.4895300 M. A. B., Abdul-Latif and Ampeng, A and Md Zain, Badrul Munir (2014) Phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences. In: The 2014 UKM FST Postgraduate Colloqium. http://eprints.uthm.edu.my/9801/ |
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Digital Repository |
| institution_category |
Local University |
| institution |
Universiti Tun Hussein Onn Malaysia |
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UTHM Institutional Repository |
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Online Access |
| topic |
QP Physiology |
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QP Physiology M. A. B., Abdul-Latif Ampeng, A Md Zain, Badrul Munir Phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences |
| description |
Phylogenetic relationships among Malaysian pig-tailed macaques have never been established even though the
data are crucial in aiding conservation plan for the species. The aims of this study is to establish the phylogenetic relationships of Macaca nemestrina in Malaysia. A total of 21 genetic samples of M. nemestrina yielding 458 bp of Dloop sequences were used in phylogenetic analyses, in addition to one sample of M. fascicularis which was used as an outgroup. Sequence character analysis revealed that D-loop locus contains 23% parsimony informative character detected among the ingroups. Further analysis indicated a clear separation between populations originating from different regions;
the Malay Peninsula populations are separated from Borneo Insular population; and Perak population formed a distinctive clade within Peninsular Malaysia populations. Phylogenetic trees (NJ, MP and Bayesian) portray a consistent clustering paradigm as Borneo population was distinguished from Peninsula population (100% bootstrap value in theNJ, MP, 1.00 posterior probability in Bayesian trees). Perak’s population was separated from other Peninsula populations (100% in NJ, 99% in MP and1.00 in Bayesian). D-loop region of mtDNA is proven to be a suitable locus in studying the separation of M. nemestrina at population level. These findings are crucial in aiding the conservation management and translocation process of M. fascicularis populations in Malaysia. |
| format |
Conference or Workshop Item |
| author |
M. A. B., Abdul-Latif Ampeng, A Md Zain, Badrul Munir |
| author_facet |
M. A. B., Abdul-Latif Ampeng, A Md Zain, Badrul Munir |
| author_sort |
M. A. B., Abdul-Latif |
| title |
Phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences |
| title_short |
Phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences |
| title_full |
Phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences |
| title_fullStr |
Phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences |
| title_full_unstemmed |
Phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences |
| title_sort |
phylogenetic relationships of malaysia's pigtailed macaque macaca nemestrina based on dloop region sequences |
| publishDate |
2014 |
| url |
http://dx.doi.org/10.1063/1.4895300 http://dx.doi.org/10.1063/1.4895300 |
| first_indexed |
2018-09-05T11:53:48Z |
| last_indexed |
2018-09-05T11:53:48Z |
| _version_ |
1610768374771482624 |