siRNA target site secondary structure predictions using local stable substructures

The crystal structure based model of the catalytic center of Ago2 revealed that the siRNA and the mRNA must be able to form an A-helix for correct positing of the scissile phosphate bond for cleavage in RNAi. This suggests that base pairing of the target mRNA with itself, i.e. secondary structure, m...

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Bibliographic Details
Main Authors: Heale, Bret S. E., Soifer, Harris S., Bowers, Chauncey, Rossi, John J.
Format: Online
Language:English
Published: Oxford University Press 2005
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC549425/