Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis

Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis

In a whole genome-based phylogeny, clinical and fecal isolates of Escherichia coli sequence type 131 (H30R1 and H30Rx subclones) from six households formed household-specific clusters, interspersed among reference ST131 genomes. This supported the fecal-urethral hypothesis and confirmed within-house...

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Main Authors: Johnson, James R., Davis, Gregg, Clabots, Connie, Johnston, Brian D., Porter, Stephen, DebRoy, Chitrita, Pomputius, William, Ender, Peter T., Cooperstock, Michael, Slater, Billie Savvas, Banerjee, Ritu, Miller, Sybille, Kisiela, Dagmara, Sokurenko, Evgeni V., Aziz, Maliha, Price, Lance B.
Format: Online
Language:English
Published: Oxford University Press 2016
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5047392/
id pubmed-5047392
recordtype oai_dc
spelling pubmed-50473922016-10-04 Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis Johnson, James R. Davis, Gregg Clabots, Connie Johnston, Brian D. Porter, Stephen DebRoy, Chitrita Pomputius, William Ender, Peter T. Cooperstock, Michael Slater, Billie Savvas Banerjee, Ritu Miller, Sybille Kisiela, Dagmara Sokurenko, Evgeni V. Aziz, Maliha Price, Lance B. Major Articles In a whole genome-based phylogeny, clinical and fecal isolates of Escherichia coli sequence type 131 (H30R1 and H30Rx subclones) from six households formed household-specific clusters, interspersed among reference ST131 genomes. This supported the fecal-urethral hypothesis and confirmed within-household strain sharing. Oxford University Press 2016-06-16 /pmc/articles/PMC5047392/ /pubmed/27703993 http://dx.doi.org/10.1093/ofid/ofw129 Text en © The Author 2016. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com.
repository_type Open Access Journal
institution_category Foreign Institution
institution US National Center for Biotechnology Information
building NCBI PubMed
collection Online Access
language English
format Online
author Johnson, James R.
Davis, Gregg
Clabots, Connie
Johnston, Brian D.
Porter, Stephen
DebRoy, Chitrita
Pomputius, William
Ender, Peter T.
Cooperstock, Michael
Slater, Billie Savvas
Banerjee, Ritu
Miller, Sybille
Kisiela, Dagmara
Sokurenko, Evgeni V.
Aziz, Maliha
Price, Lance B.
spellingShingle Johnson, James R.
Davis, Gregg
Clabots, Connie
Johnston, Brian D.
Porter, Stephen
DebRoy, Chitrita
Pomputius, William
Ender, Peter T.
Cooperstock, Michael
Slater, Billie Savvas
Banerjee, Ritu
Miller, Sybille
Kisiela, Dagmara
Sokurenko, Evgeni V.
Aziz, Maliha
Price, Lance B.
Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis
author_facet Johnson, James R.
Davis, Gregg
Clabots, Connie
Johnston, Brian D.
Porter, Stephen
DebRoy, Chitrita
Pomputius, William
Ender, Peter T.
Cooperstock, Michael
Slater, Billie Savvas
Banerjee, Ritu
Miller, Sybille
Kisiela, Dagmara
Sokurenko, Evgeni V.
Aziz, Maliha
Price, Lance B.
author_sort Johnson, James R.
title Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis
title_short Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis
title_full Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis
title_fullStr Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis
title_full_unstemmed Household Clustering of Escherichia coli Sequence Type 131 Clinical and Fecal Isolates According to Whole Genome Sequence Analysis
title_sort household clustering of escherichia coli sequence type 131 clinical and fecal isolates according to whole genome sequence analysis
description In a whole genome-based phylogeny, clinical and fecal isolates of Escherichia coli sequence type 131 (H30R1 and H30Rx subclones) from six households formed household-specific clusters, interspersed among reference ST131 genomes. This supported the fecal-urethral hypothesis and confirmed within-household strain sharing.
publisher Oxford University Press
publishDate 2016
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5047392/
_version_ 1613670150277431296

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