MDSINE: Microbial Dynamical Systems INference Engine for microbiome time-series analyses

MDSINE: Microbial Dynamical Systems INference Engine for microbiome time-series analyses

Predicting dynamics of host-microbial ecosystems is crucial for the rational design of bacteriotherapies. We present MDSINE, a suite of algorithms for inferring dynamical systems models from microbiome time-series data and predicting temporal behaviors. Using simulated data, we demonstrate that MDSI...

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Bibliographic Details
Main Authors: Bucci, Vanni, Tzen, Belinda, Li, Ning, Simmons, Matt, Tanoue, Takeshi, Bogart, Elijah, Deng, Luxue, Yeliseyev, Vladimir, Delaney, Mary L., Liu, Qing, Olle, Bernat, Stein, Richard R., Honda, Kenya, Bry, Lynn, Gerber, Georg K.
Format: Online
Language:English
Published: BioMed Central 2016
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4893271/

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