Interactive analysis and assessment of single-cell copy-number variations

Interactive analysis and assessment of single-cell copy-number variations

We present an open-source web platform, Ginkgo (http://qb.cshl.edu/ginkgo), for the analysis and assessment of single-cell copy-number variations (CNVs). Ginkgo automatically constructs copy-number profiles of cells from mapped reads and constructs phylogenetic trees of related cells. We validate Gi...

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Bibliographic Details
Main Authors: Garvin, Tyler, Aboukhalil, Robert, Kendall, Jude, Baslan, Timour, Atwal, Gurinder S., Hicks, James, Wigler, Michael, Schatz, Michael C.
Format: Online
Language:English
Published: 2015
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4775251/

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https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4775251/

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