Development of an Analysis Pipeline Characterizing Multiple Hypervariable Regions of 16S rRNA Using Mock Samples

Development of an Analysis Pipeline Characterizing Multiple Hypervariable Regions of 16S rRNA Using Mock Samples

Bibliographic Details
Main Authors:	Barb, Jennifer J., Oler, Andrew J., Kim, Hyung-Suk, Chalmers, Natalia, Wallen, Gwenyth R., Cashion, Ann, Munson, Peter J., Ames, Nancy J.
Format:	Online
Language:	English
Published:	Public Library of Science 2016
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4734828/

Similar Items

Sensitivity and correlation of hypervariable regions in 16S rRNA genes in phylogenetic analysis
by: Yang, Bo, et al.
Published: (2016)

16S rRNA gene sequencing of mock microbial populations- impact of DNA extraction method, primer choice and sequencing platform
by: Fouhy, Fiona, et al.
Published: (2016)

16S Classifier: A Tool for Fast and Accurate Taxonomic Classification of 16S rRNA Hypervariable Regions in Metagenomic Datasets
by: Chaudhary, Nikhil, et al.
Published: (2015)

Analysis of the Cystic Fibrosis Lung Microbiota via Serial Illumina Sequencing of Bacterial 16S rRNA Hypervariable Regions
by: Maughan, Heather, et al.
Published: (2012)

Mocking the MOOCs
by: Yngve Nordkvelle
Published: (2013-11-01)

Mock-up centre
Published: (1998)

A mock operational audit based on library research
by: Raymond J., Clay
Published: (1996)

A comprehensive evaluation of the sl1p pipeline for 16S rRNA gene sequencing analysis
by: Fiona J. Whelan, et al.
Published: (2017-08-01)

Taxonomic Precision of Different Hypervariable Regions of 16S rRNA Gene and Annotation Methods for Functional Bacterial Groups in Biological Wastewater Treatment
by: Guo, Feng, et al.
Published: (2013)

‘Coroners’ Court Mock Training Course’
by: Claxton, Garry, et al.
Published: (2013)

Allele frequencies distribution of hypervariable loci in Melanau population sample of Unimas
by: Nur Sulriany, .Binti Sulaiman.
Published: (2006)

Pipeline for amplifying and analyzing amplicons of the V1–V3 region of the 16S rRNA gene
by: Allen, Heather K., et al.
Published: (2016)

Randomized Trial of Hypnosis as a Pain and Symptom Management Strategy in Adults with Sickle Cell Disease
by: Wallen, Gwenyth R, et al.
Published: (2014)

Anorectal Transplantation in Human Cadavers: Mock Anorectal Allotransplantation
by: Araki, Jun, et al.
Published: (2013)

Mock theta functions and Appell–Lerch sums
by: Bin Chen
Published: (2018-07-01)

Mock sexual health clinics for school pupils
by: Pat, Jackson, et al.
Published: (1997)

Bacterial genotyping by 16S rRNA mass cataloging
by: Jackson, George W, et al.
Published: (2006)

To Tell or Not to Tell: Shared Decision Making, CAM Use and Disclosure Among Underserved Patients with Rheumatic Diseases
by: Wallen, Gwenyth R., et al.
Published: (2012)

Sleep Disturbances in Individuals with Alcohol-Related Disorders: A Review of Cognitive-Behavioral Therapy for Insomnia (CBT-I) and Associated Non-Pharmacological Therapies
by: Brooks, Alyssa T, et al.
Published: (2014)

A Characterization of the Oral Microbiome in Allogeneic Stem Cell Transplant Patients
by: Ames, Nancy J., et al.
Published: (2012)

16S rRNA gene pyrosequencing of reference and clinical samples and investigation of the temperature stability of microbiome profiles
by: Hang, Jun, et al.
Published: (2014)

Reconstructing 16S rRNA genes in metagenomic data
by: Yuan, Cheng, et al.
Published: (2015)

Rapid 16S rRNA Next-Generation Sequencing of Polymicrobial Clinical Samples for Diagnosis of Complex Bacterial Infections
by: Salipante, Stephen J., et al.
Published: (2013)

The distribution, diversity, and importance of 16S rRNA gene introns in the order Thermoproteales
by: Jay, Zackary J., et al.
Published: (2015)

Multiplex 16S rRNA‐derived geno‐biochip for detection of 16 bacterial pathogens from contaminated foods
by: Shin, Hwa Hui, et al.
Published: (2016)

Strawberry cultivar identification based on hypervariable SSR markers
by: Honjo, Masanori, et al.
Published: (2011)

Hypervariable antigen genes in malaria have ancient roots
by: Zilversmit, Martine M, et al.
Published: (2013)

Evolution of the hepatitis E virus hypervariable region
by: Smith, Donald B., et al.
Published: (2012)

Improved Detection of Bifidobacteria with Optimised 16S rRNA-Gene Based Pyrosequencing
by: Sim, Kathleen, et al.
Published: (2012)

Hypervariability within the Rifin, Stevor and Pfmc-2TM superfamilies in Plasmodium falciparum
by: Lavazec, Catherine, et al.
Published: (2006)

Shared Decision Making: A Fundamental Tenet in a Conceptual Framework of Integrative Healthcare Delivery
by: Brooks, Alyssa T., et al.
Published: (2013)

Oral Microbiome Profiles: 16S rRNA Pyrosequencing and Microarray Assay Comparison
by: Ahn, Jiyoung, et al.
Published: (2011)

The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies
by: Brooks, J Paul, et al.
Published: (2015)

Critical evaluation of mock counseling sessions: learning through experience
by: Rais, Haniza, et al.
Published: (2015)

A history of education in public health: health that mocks the doctors' rules
by: Hardy, Anne
Published: (1992)

‘Mock-Documentary’ Sebagai Alternatif Dalam Penerbitan Filem Di Malaysia
by: Kalip@Khalid, Khazatulzihan
Published: (2016)

Role play with mock-ups as a communication tool in design practice
by: Dolah, Mohd Shahrizal, et al.
Published: (2014)

Innocent until Primed: Mock Jurors' Racially Biased Response to the Presumption of Innocence
by: Young, Danielle M., et al.
Published: (2014)

Exploring the usability of a videophone mock-up for persons with dementia and their significant others
by: Boman, Inga-Lill, et al.
Published: (2014)

A Study of Gender Performativity in Virginia Woolf’s Orlando: A Mocking Biography
by: Moslehi M., et al.
Published: (2016-01-01)