All-atom molecular dynamics analysis of multi-peptide systems reproduces peptide solubility in line with experimental observations

In order to investigate the contribution of individual amino acids to protein and peptide solubility, we carried out 100 ns molecular dynamics (MD) simulations of 106 Å3 cubic boxes containing ~3 × 104 water molecules and 27 tetra-peptides regularly positioned at 23 Å from each other and composed of...

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Bibliographic Details
Main Authors: Kuroda, Yutaka, Suenaga, Atsushi, Sato, Yuji, Kosuda, Satoshi, Taiji, Makoto
Format: Online
Language:English
Published: Nature Publishing Group 2016
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4730209/