Haplotype Detection from Next-Generation Sequencing in High-Ploidy-Level Species: 45S rDNA Gene Copies in the Hexaploid Spartina maritima
Gene and whole-genome duplications are widespread in plant nuclear genomes, resulting in sequence heterogeneity. Identification of duplicated genes may be particularly challenging in highly redundant genomes, especially when there are no diploid parents as a reference. Here, we developed a pipeline...
Main Authors: | Boutte, Julien, Aliaga, Benoît, Lima, Oscar, Ferreira de Carvalho, Julie, Ainouche, Abdelkader, Macas, Jiri, Rousseau-Gueutin, Mathieu, Coriton, Olivier, Ainouche, Malika, Salmon, Armel |
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Format: | Online |
Language: | English |
Published: |
Genetics Society of America
2015
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Online Access: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704722/ |
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