SHAPE directed RNA folding

Summary: Chemical mapping experiments allow for nucleotide resolution assessment of RNA structure. We demonstrate that different strategies of integrating probing data with thermodynamics-based RNA secondary structure prediction algorithms can be implemented by means of soft constraints. This amount...

Full description

Bibliographic Details
Main Authors: Lorenz, Ronny, Luntzer, Dominik, Hofacker, Ivo L., Stadler, Peter F., Wolfinger, Michael T.
Format: Online
Language:English
Published: Oxford University Press 2016
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4681990/