Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa

MicroRNAs (miRNAs) play a critical role in post-transcriptional gene regulation that down-regulates target genes by mRNA degradation or translational repression. Evidence is increasing for their crucial roles during plant development. Identification of miRNAs at the global genome-level by high-throu...

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Main Authors:	Fan, Wenna, Shi, Pengfei, Wang, Chengzhang
Format:	Online
Language:	English
Published:	Elsevier 2014
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535959/

id	pubmed-4535959
recordtype	oai_dc
spelling	pubmed-45359592015-10-19 Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa Fan, Wenna Shi, Pengfei Wang, Chengzhang Data in Brief MicroRNAs (miRNAs) play a critical role in post-transcriptional gene regulation that down-regulates target genes by mRNA degradation or translational repression. Evidence is increasing for their crucial roles during plant development. Identification of miRNAs at the global genome-level by high-throughput sequencing is essential to functionally characterize miRNAs in plants. Alfalfa (Medicago sativa L.) is one of the most widely cultivated perennial forage legumes worldwide. Fall dormancy is an adaptive character related to the biomass production and winter survival in alfalfa. However, little is known about miRNA-mediated developmental regulation of fall dormancy in alfalfa. Here, we provide detailed experimental methods and analysis pipeline in our study to identify miRNAs that were responsive to fall dormancy (Fan W et al., Genome-wide identification of different dormant Medicago sativa L. microRNAs in response to fall dormancy, submitted for publication) for reproducible research. The data generated in our work provide meaningful information for understanding the roles of miRNAs in response to seasonal change and growth regulation in alfalfa. Elsevier 2014-09-28 /pmc/articles/PMC4535959/ /pubmed/26484115 http://dx.doi.org/10.1016/j.gdata.2014.09.007 Text en © 2014 The Authors http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).
repository_type	Open Access Journal
institution_category	Foreign Institution
institution	US National Center for Biotechnology Information
building	NCBI PubMed
collection	Online Access
language	English
format	Online
author	Fan, Wenna Shi, Pengfei Wang, Chengzhang
spellingShingle	Fan, Wenna Shi, Pengfei Wang, Chengzhang Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa
author_facet	Fan, Wenna Shi, Pengfei Wang, Chengzhang
author_sort	Fan, Wenna
title	Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa
title_short	Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa
title_full	Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa
title_fullStr	Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa
title_full_unstemmed	Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa
title_sort	deep sequencing of the microrna expression in fall dormant and non-dormant alfalfa
description	MicroRNAs (miRNAs) play a critical role in post-transcriptional gene regulation that down-regulates target genes by mRNA degradation or translational repression. Evidence is increasing for their crucial roles during plant development. Identification of miRNAs at the global genome-level by high-throughput sequencing is essential to functionally characterize miRNAs in plants. Alfalfa (Medicago sativa L.) is one of the most widely cultivated perennial forage legumes worldwide. Fall dormancy is an adaptive character related to the biomass production and winter survival in alfalfa. However, little is known about miRNA-mediated developmental regulation of fall dormancy in alfalfa. Here, we provide detailed experimental methods and analysis pipeline in our study to identify miRNAs that were responsive to fall dormancy (Fan W et al., Genome-wide identification of different dormant Medicago sativa L. microRNAs in response to fall dormancy, submitted for publication) for reproducible research. The data generated in our work provide meaningful information for understanding the roles of miRNAs in response to seasonal change and growth regulation in alfalfa.
publisher	Elsevier
publishDate	2014
url	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4535959/
_version_	1613259485266051072

Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa

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