GBshape: a genome browser database for DNA shape annotations
Many regulatory mechanisms require a high degree of specificity in protein-DNA binding. Nucleotide sequence does not provide an answer to the question of why a protein binds only to a small subset of the many putative binding sites in the genome that share the same core motif. Whereas higher-order e...
Main Authors: | Chiu, Tsu-Pei, Yang, Lin, Zhou, Tianyin, Main, Bradley J., Parker, Stephen C.J., Nuzhdin, Sergey V., Tullius, Thomas D., Rohs, Remo |
---|---|
Format: | Online |
Language: | English |
Published: |
Oxford University Press
2015
|
Online Access: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4384032/ |
Similar Items
-
DNAshapeR: an R/Bioconductor package for DNA shape prediction and feature encoding
by: Chiu, Tsu-Pei, et al.
Published: (2016) -
Covariation between homeodomain transcription factors and the shape of their DNA binding sites
by: Dror, Iris, et al.
Published: (2014) -
TFBSshape: a motif database for DNA shape features of transcription factor binding sites
by: Yang, Lin, et al.
Published: (2014) -
The Vertebrate Genome Annotation browser 10 years on
by: Harrow, Jennifer L., et al.
Published: (2014) -
The UCSC Genome Browser Database: update 2006
by: Hinrichs, A. S., et al.
Published: (2006)