Content discovery and retrieval services at the European Nucleotide Archive

The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is Europe's primary resource for nucleotide sequence information. With the growing volume and diversity of public sequencing data comes the need for increased sophistication in data organisation, presentation and search services so...

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Main Authors: Silvester, Nicole, Alako, Blaise, Amid, Clara, Cerdeño-Tárraga, Ana, Cleland, Iain, Gibson, Richard, Goodgame, Neil, ten Hoopen, Petra, Kay, Simon, Leinonen, Rasko, Li, Weizhong, Liu, Xin, Lopez, Rodrigo, Pakseresht, Nima, Pallreddy, Swapna, Plaister, Sheila, Radhakrishnan, Rajesh, Rossello, Marc, Senf, Alexander, Smirnov, Dmitriy, Toribio, Ana Luisa, Vaughan, Daniel, Zalunin, Vadim, Cochrane, Guy
Format: Online
Language:English
Published: Oxford University Press 2015
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383942/
id pubmed-4383942
recordtype oai_dc
spelling pubmed-43839422015-04-08 Content discovery and retrieval services at the European Nucleotide Archive Silvester, Nicole Alako, Blaise Amid, Clara Cerdeño-Tárraga, Ana Cleland, Iain Gibson, Richard Goodgame, Neil ten Hoopen, Petra Kay, Simon Leinonen, Rasko Li, Weizhong Liu, Xin Lopez, Rodrigo Pakseresht, Nima Pallreddy, Swapna Plaister, Sheila Radhakrishnan, Rajesh Rossello, Marc Senf, Alexander Smirnov, Dmitriy Toribio, Ana Luisa Vaughan, Daniel Zalunin, Vadim Cochrane, Guy Database Issue The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is Europe's primary resource for nucleotide sequence information. With the growing volume and diversity of public sequencing data comes the need for increased sophistication in data organisation, presentation and search services so as to maximise its discoverability and usability. In response to this, ENA has been introducing and improving checklists for use during submission and expanding its search facilities to provide targeted search results. Here, we give a brief update on ENA content and some major developments undertaken in data submission services during 2014. We then describe in more detail the services we offer for data discovery and retrieval. Oxford University Press 2015-01-28 2014-11-17 /pmc/articles/PMC4383942/ /pubmed/25404130 http://dx.doi.org/10.1093/nar/gku1129 Text en © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
repository_type Open Access Journal
institution_category Foreign Institution
institution US National Center for Biotechnology Information
building NCBI PubMed
collection Online Access
language English
format Online
author Silvester, Nicole
Alako, Blaise
Amid, Clara
Cerdeño-Tárraga, Ana
Cleland, Iain
Gibson, Richard
Goodgame, Neil
ten Hoopen, Petra
Kay, Simon
Leinonen, Rasko
Li, Weizhong
Liu, Xin
Lopez, Rodrigo
Pakseresht, Nima
Pallreddy, Swapna
Plaister, Sheila
Radhakrishnan, Rajesh
Rossello, Marc
Senf, Alexander
Smirnov, Dmitriy
Toribio, Ana Luisa
Vaughan, Daniel
Zalunin, Vadim
Cochrane, Guy
spellingShingle Silvester, Nicole
Alako, Blaise
Amid, Clara
Cerdeño-Tárraga, Ana
Cleland, Iain
Gibson, Richard
Goodgame, Neil
ten Hoopen, Petra
Kay, Simon
Leinonen, Rasko
Li, Weizhong
Liu, Xin
Lopez, Rodrigo
Pakseresht, Nima
Pallreddy, Swapna
Plaister, Sheila
Radhakrishnan, Rajesh
Rossello, Marc
Senf, Alexander
Smirnov, Dmitriy
Toribio, Ana Luisa
Vaughan, Daniel
Zalunin, Vadim
Cochrane, Guy
Content discovery and retrieval services at the European Nucleotide Archive
author_facet Silvester, Nicole
Alako, Blaise
Amid, Clara
Cerdeño-Tárraga, Ana
Cleland, Iain
Gibson, Richard
Goodgame, Neil
ten Hoopen, Petra
Kay, Simon
Leinonen, Rasko
Li, Weizhong
Liu, Xin
Lopez, Rodrigo
Pakseresht, Nima
Pallreddy, Swapna
Plaister, Sheila
Radhakrishnan, Rajesh
Rossello, Marc
Senf, Alexander
Smirnov, Dmitriy
Toribio, Ana Luisa
Vaughan, Daniel
Zalunin, Vadim
Cochrane, Guy
author_sort Silvester, Nicole
title Content discovery and retrieval services at the European Nucleotide Archive
title_short Content discovery and retrieval services at the European Nucleotide Archive
title_full Content discovery and retrieval services at the European Nucleotide Archive
title_fullStr Content discovery and retrieval services at the European Nucleotide Archive
title_full_unstemmed Content discovery and retrieval services at the European Nucleotide Archive
title_sort content discovery and retrieval services at the european nucleotide archive
description The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is Europe's primary resource for nucleotide sequence information. With the growing volume and diversity of public sequencing data comes the need for increased sophistication in data organisation, presentation and search services so as to maximise its discoverability and usability. In response to this, ENA has been introducing and improving checklists for use during submission and expanding its search facilities to provide targeted search results. Here, we give a brief update on ENA content and some major developments undertaken in data submission services during 2014. We then describe in more detail the services we offer for data discovery and retrieval.
publisher Oxford University Press
publishDate 2015
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383942/
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