BigDataScript: a scripting language for data pipelines

Motivation: The analysis of large biological datasets often requires complex processing pipelines that run for a long time on large computational infrastructures. We designed and implemented a simple script-like programming language with a clean and minimalist syntax to develop and manage pipeline e...

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Bibliographic Details
Main Authors: Cingolani, Pablo, Sladek, Rob, Blanchette, Mathieu
Format: Online
Language:English
Published: Oxford University Press 2015
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4271142/