Genome Re-Sequencing of Semi-Wild Soybean Reveals a Complex Soja Population Structure and Deep Introgression

Genome Re-Sequencing of Semi-Wild Soybean Reveals a Complex Soja Population Structure and Deep Introgression

Semi-wild soybean is a unique type of soybean that retains both wild and domesticated characteristics, which provides an important intermediate type for understanding the evolution of the subgenus Soja population in the Glycine genus. In this study, a semi-wild soybean line (Maliaodou) and a wild li...

Full description

Bibliographic Details
Main Authors:	Qiu, Jie, Wang, Yu, Wu, Sanling, Wang, Ying-Ying, Ye, Chu-Yu, Bai, Xuefei, Li, Zefeng, Yan, Chenghai, Wang, Weidi, Wang, Ziqiang, Shu, Qingyao, Xie, Jiahua, Lee, Suk-Ha, Fan, Longjiang
Format:	Online
Language:	English
Published:	Public Library of Science 2014
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4181298/

Similar Items

Identification and Analysis of NaHCO3 Stress Responsive Genes in Wild Soybean (Glycine soja) Roots by RNA-seq
by: Zhang, Jinlong, et al.
Published: (2016)

Environmental and Historical Determinants of Patterns of Genetic Differentiation in Wild Soybean (Glycine soja Sieb. et Zucc)
by: He, Shui-Lian, et al.
Published: (2016)

Genomic differences between cultivated soybean, G. max and its wild relative G. soja
by: Joshi, Trupti, et al.
Published: (2013)

Genome-Wide Association Study of Resistance to Soybean Cyst Nematode (Heterodera glycines) HG Type 2.5.7 in Wild Soybean (Glycine soja)
by: Zhang, Hengyou, et al.
Published: (2016)

Association mapping of yield-related traits and SSR markers in wild soybean (Glycine soja Sieb. and Zucc.)
by: Hu, Zhenbin, et al.
Published: (2014)

Integration of the Draft Sequence and Physical Map as a Framework for Genomic Research in Soybean (Glycine max (L.) Merr.) and Wild Soybean (Glycine soja Sieb. and Zucc.)
by: Ha, Jungmin, et al.
Published: (2012)

Proteomics study of changes in soybean lines resistant and sensitive to Phytophthora sojae
by: Zhang, YuMei, et al.
Published: (2011)

Overexpression of Soybean Isoflavone Reductase (GmIFR) Enhances Resistance to Phytophthora sojae in Soybean
by: Cheng, Qun, et al.
Published: (2015)

Genetic Diversity and Population Structure: Implications for Conservation of Wild Soybean (Glycine soja Sieb. et Zucc) Based on Nuclear and Chloroplast Microsatellite Variation
by: He, Shuilian, et al.
Published: (2012)

Environmental versus geographical effects on genomic variation in wild soybean (Glycine soja) across its native range in northeast Asia
by: Leamy, Larry J., et al.
Published: (2016)

Environmental Association Analyses Identify Candidates for Abiotic Stress Tolerance in Glycine soja, the Wild Progenitor of Cultivated Soybeans
by: Anderson, Justin E., et al.
Published: (2016)

Natural diversity of seed α-tocopherol ratio in wild soybean (Glycine soja) germplasm collection
by: Dwiyanti, Maria Stefanie, et al.
Published: (2016)

A 14-3-3 Family Protein from Wild Soybean (Glycine Soja) Regulates ABA Sensitivity in Arabidopsis
by: Sun, Xiaoli, et al.
Published: (2015)

Comparative RNA-Seq Analysis Uncovers a Complex Regulatory Network for Soybean Cyst Nematode Resistance in Wild Soybean (Glycine soja)
by: Hengyou Zhang, et al.
Published: (2017-08-01)

Characterization of Natural and Simulated Herbivory on Wild Soybean (Glycine soja Seib. et Zucc.) for Use in Ecological Risk Assessment of Insect Protected Soybean
by: Goto, Hidetoshi, et al.
Published: (2016)

Pathogenic diversity of Phytophthora sojae and breeding strategies to develop Phytophthora-resistant soybeans
by: Sugimoto, Takuma, et al.
Published: (2012)

Occurrence of Soybean Sleeping Blight Caused by Septogloeum sojae in Korea
by: Hong, Sung Kee, et al.
Published: (2012)

PsVPS1, a Dynamin-Related Protein, Is Involved in Cyst Germination and Soybean Infection of Phytophthora sojae
by: Li, Delong, et al.
Published: (2013)

The Genomic Signature of Crop-Wild Introgression in Maize
by: Hufford, Matthew B., et al.
Published: (2013)

Correction: The Genomic Signature of Crop-Wild Introgression in Maize
by: Hufford, Matthew B., et al.
Published: (2013)

QTL Location and Epistatic Effect Analysis of 100-Seed Weight Using Wild Soybean (Glycine soja Sieb. & Zucc.) Chromosome Segment Substitution Lines
by: Xin, Dawei, et al.
Published: (2016)

Dissection of two soybean QTL conferring partial resistance to Phytophthora sojae through sequence and gene expression analysis
by: Wang, Hehe, et al.
Published: (2012)

Novel quantitative trait loci for partial resistance to Phytophthora sojae in soybean PI 398841
by: Lee, Sungwoo, et al.
Published: (2013)

Introgression Between Cultivars and Wild Populations of Momordica charantia L. (Cucurbitaceae) in Taiwan
by: Liao, Pei-Chun, et al.
Published: (2012)

Marker assisted accelerated introgression of null allele of kunitz trypsin inhibitor in soybean
by: Kumar, Vineet, et al.
Published: (2015)

Genomewide Variation in an Introgression Line of Rice-Zizania Revealed by Whole-Genome re-Sequencing
by: Wang, Zhen-Hui, et al.
Published: (2013)

Sequence Variants of the Phytophthora sojae RXLR Effector Avr3a/5 Are Differentially Recognized by Rps3a and Rps5 in Soybean
by: Dong, Suomeng, et al.
Published: (2011)

Extensive Microsatellite Variation in Rice Induced by Introgression from Wild Rice (Zizania latifolia Griseb.)
by: Dong, Zhenying, et al.
Published: (2013)

Correction: Extensive Microsatellite Variation in Rice Induced by Introgression from Wild Rice (Zizania latifolia Griseb.)
by: Dong, Zhenying, et al.
Published: (2013)

Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
by: Tang, She, et al.
Published: (2012)

Molecular response to the pathogen Phytophthora sojae among ten soybean near isogenic lines revealed by comparative transcriptomics
by: Lin, Feng, et al.
Published: (2014)

Identification and Functional Characterization of the Soybean GmaPPO12 Promoter Conferring Phytophthora sojae Induced Expression
by: Chai, Chunyue, et al.
Published: (2013)

Stable predictive markers for Phytophthora sojae avirulence genes that impair infection of soybean uncovered by whole genome sequencing of 31 isolates
by: Geneviève Arsenault-Labrecque, et al.
Published: (2018-07-01)

Silicon protects soybean plants against Phytophthora sojae by interfering with effector-receptor expression
by: Aliyeh Rasoolizadeh, et al.
Published: (2018-05-01)

Genome-wide association mapping of partial resistance to Phytophthora sojae in soybean plant introductions from the Republic of Korea
by: Schneider, Rhiannon, et al.
Published: (2016)

Phenotypic evaluation and genetic dissection of resistance to Phytophthora sojae in the Chinese soybean mini core collection
by: Huang, Jing, et al.
Published: (2016)

Genetic variants in root architecture-related genes in a Glycine soja accession, a potential resource to improve cultivated soybean
by: Prince, Silvas J, et al.
Published: (2015)

Genome-wide identification of non-coding RNAs interacted with microRNAs in soybean
by: Ye, Chu-Yu, et al.
Published: (2014)

A metapopulation model for the introgression from genetically modified plants into their wild relatives
by: Meirmans, Patrick G, et al.
Published: (2009)

Introgression potential between safflower (Carthamus tinctorius) and wild relatives of the genus Carthamus
by: Mayerhofer, Marion, et al.
Published: (2011)