Orione, a web-based framework for NGS analysis in microbiology

Summary: End-to-end next-generation sequencing microbiology data analysis requires a diversity of tools covering bacterial resequencing, de novo assembly, scaffolding, bacterial RNA-Seq, gene annotation and metagenomics. However, the construction of computational pipelines that use different softwar...

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Bibliographic Details
Main Authors: Cuccuru, Gianmauro, Orsini, Massimiliano, Pinna, Andrea, Sbardellati, Andrea, Soranzo, Nicola, Travaglione, Antonella, Uva, Paolo, Zanetti, Gianluigi, Fotia, Giorgio
Format: Online
Language:English
Published: Oxford University Press 2014
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4071203/