SOAPfuse: an algorithm for identifying fusion transcripts from paired-end RNA-Seq data

SOAPfuse: an algorithm for identifying fusion transcripts from paired-end RNA-Seq data

We have developed a new method, SOAPfuse, to identify fusion transcripts from paired-end RNA-Seq data. SOAPfuse applies an improved partial exhaustion algorithm to construct a library of fusion junction sequences, which can be used to efficiently identify fusion events, and employs a series of filte...

Full description

Bibliographic Details
Main Authors: Jia, Wenlong, Qiu, Kunlong, He, Minghui, Song, Pengfei, Zhou, Quan, Zhou, Feng, Yu, Yuan, Zhu, Dandan, Nickerson, Michael L, Wan, Shengqing, Liao, Xiangke, Zhu, Xiaoqian, Peng, Shaoliang, Li, Yingrui, Wang, Jun, Guo, Guangwu
Format: Online
Language:English
Published: BioMed Central 2013
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4054009/

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4054009/

Similar Items