Simultaneous reconstruction of evolutionary history and epidemiological dynamics from viral sequences with the birth–death SIR model
The evolution of RNA viruses, such as human immunodeficiency virus (HIV), hepatitis C virus and influenza virus, occurs so rapidly that the viruses' genomes contain information on past ecological dynamics. Hence, we develop a phylodynamic method that enables the joint estimation of epidemiologi...
| Main Authors: | , , , |
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| Format: | Online |
| Language: | English |
| Published: |
The Royal Society
2014
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| Online Access: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3973358/ |