Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon

A photoautotrophic cyanobacterium, Rubidibacter lacunae was reported in 2008 for the first time. The type strain, KORDI 51-2T, was isolated from seawater of Chuuk lagoon located in a tropical area. Although it belonged to a clade exclusively comprised of extremely halotolerant strains by phylogeneti...

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Main Authors:	Choi, Dong Han, Ryu, Jee-Youn, Kwon, Kae-Kyoung, Lee, Jung-Hyun, Kim, Changhoon, Lee, Charity M., Noh, Jae Hoon
Format:	Online
Language:	English
Published:	Michigan State University 2013
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910548/

id	pubmed-3910548
recordtype	oai_dc
spelling	pubmed-39105482014-02-05 Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon Choi, Dong Han Ryu, Jee-Youn Kwon, Kae-Kyoung Lee, Jung-Hyun Kim, Changhoon Lee, Charity M. Noh, Jae Hoon Short Genome Reports A photoautotrophic cyanobacterium, Rubidibacter lacunae was reported in 2008 for the first time. The type strain, KORDI 51-2T, was isolated from seawater of Chuuk lagoon located in a tropical area. Although it belonged to a clade exclusively comprised of extremely halotolerant strains by phylogenetic analyses, R. lacunae is known to be incapable of growth at high salt concentration over 10%. Here we report the main features of the genome of R. lacunae strain KORDI 51-2T. The genome of R. lacunae contains a gene cluster for phosphonate utilization encoding three transporters, one regulator and eight C-P lyase subunits. Michigan State University 2013-10-16 /pmc/articles/PMC3910548/ /pubmed/24501656 http://dx.doi.org/10.4056/sigs.4398180 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
repository_type	Open Access Journal
institution_category	Foreign Institution
institution	US National Center for Biotechnology Information
building	NCBI PubMed
collection	Online Access
language	English
format	Online
author	Choi, Dong Han Ryu, Jee-Youn Kwon, Kae-Kyoung Lee, Jung-Hyun Kim, Changhoon Lee, Charity M. Noh, Jae Hoon
spellingShingle	Choi, Dong Han Ryu, Jee-Youn Kwon, Kae-Kyoung Lee, Jung-Hyun Kim, Changhoon Lee, Charity M. Noh, Jae Hoon Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon
author_facet	Choi, Dong Han Ryu, Jee-Youn Kwon, Kae-Kyoung Lee, Jung-Hyun Kim, Changhoon Lee, Charity M. Noh, Jae Hoon
author_sort	Choi, Dong Han
title	Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon
title_short	Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon
title_full	Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon
title_fullStr	Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon
title_full_unstemmed	Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon
title_sort	draft genome sequence of rubidibacter lacunae strain kordi 51-2t, a cyanobacterium isolated from seawater of chuuk lagoon
description	A photoautotrophic cyanobacterium, Rubidibacter lacunae was reported in 2008 for the first time. The type strain, KORDI 51-2T, was isolated from seawater of Chuuk lagoon located in a tropical area. Although it belonged to a clade exclusively comprised of extremely halotolerant strains by phylogenetic analyses, R. lacunae is known to be incapable of growth at high salt concentration over 10%. Here we report the main features of the genome of R. lacunae strain KORDI 51-2T. The genome of R. lacunae contains a gene cluster for phosphonate utilization encoding three transporters, one regulator and eight C-P lyase subunits.
publisher	Michigan State University
publishDate	2013
url	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910548/
_version_	1612054030292353024

Draft genome sequence of Rubidibacter lacunae strain KORDI 51-2T, a cyanobacterium isolated from seawater of Chuuk lagoon

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