Badger—an accessible genome exploration environment

Summary: High-quality draft genomes are now easy to generate, as sequencing and assembly costs have dropped dramatically. However, building a user-friendly searchable Web site and database for a newly annotated genome is not straightforward. Here we present Badger, a lightweight and easy-to-install...

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Main Authors:	Elsworth, Ben, Jones, Martin, Blaxter, Mark
Format:	Online
Language:	English
Published:	Oxford University Press 2013
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3799468/

id	pubmed-3799468
recordtype	oai_dc
spelling	pubmed-37994682013-10-18 Badger—an accessible genome exploration environment Elsworth, Ben Jones, Martin Blaxter, Mark Applications Notes Summary: High-quality draft genomes are now easy to generate, as sequencing and assembly costs have dropped dramatically. However, building a user-friendly searchable Web site and database for a newly annotated genome is not straightforward. Here we present Badger, a lightweight and easy-to-install genome exploration environment designed for next generation non-model organism genomes. Oxford University Press 2013-11-01 2013-08-11 /pmc/articles/PMC3799468/ /pubmed/23940251 http://dx.doi.org/10.1093/bioinformatics/btt466 Text en © The Author 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
repository_type	Open Access Journal
institution_category	Foreign Institution
institution	US National Center for Biotechnology Information
building	NCBI PubMed
collection	Online Access
language	English
format	Online
author	Elsworth, Ben Jones, Martin Blaxter, Mark
spellingShingle	Elsworth, Ben Jones, Martin Blaxter, Mark Badger—an accessible genome exploration environment
author_facet	Elsworth, Ben Jones, Martin Blaxter, Mark
author_sort	Elsworth, Ben
title	Badger—an accessible genome exploration environment
title_short	Badger—an accessible genome exploration environment
title_full	Badger—an accessible genome exploration environment
title_fullStr	Badger—an accessible genome exploration environment
title_full_unstemmed	Badger—an accessible genome exploration environment
title_sort	badger—an accessible genome exploration environment
description	Summary: High-quality draft genomes are now easy to generate, as sequencing and assembly costs have dropped dramatically. However, building a user-friendly searchable Web site and database for a newly annotated genome is not straightforward. Here we present Badger, a lightweight and easy-to-install genome exploration environment designed for next generation non-model organism genomes.
publisher	Oxford University Press
publishDate	2013
url	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3799468/
_version_	1612019097046876160

Badger—an accessible genome exploration environment

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