Evaluating a linear k-mer model for protein-DNA interactions using high-throughput SELEX data

Transcription factor (TF) binding to DNA can be modeled in a number of different ways. It is highly debated which modeling methods are the best, how the models should be built and what can they be applied to. In this study a linear k-mer model proposed for predicting TF specificity in protein bindin...

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Bibliographic Details
Main Authors: Kähärä, Juhani, Lähdesmäki, Harri
Format: Online
Language:English
Published: BioMed Central 2013
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3750486/