SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner

SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner

To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be configured to favor speed in trade of accuracy and sensitivity. SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, d...

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Bibliographic Details
Main Authors: Luo, Ruibang, Wong, Thomas, Zhu, Jianqiao, Liu, Chi-Man, Zhu, Xiaoqian, Wu, Edward, Lee, Lap-Kei, Lin, Haoxiang, Zhu, Wenjuan, Cheung, David W., Ting, Hing-Fung, Yiu, Siu-Ming, Peng, Shaoliang, Yu, Chang, Li, Yingrui, Li, Ruiqiang, Lam, Tak-Wah
Format: Online
Language:English
Published: Public Library of Science 2013
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3669295/

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3669295/

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