File Formats Commonly Used in Mass Spectrometry Proteomics*
The application of mass spectrometry (MS) to the analysis of proteomes has enabled the high-throughput identification and abundance measurement of hundreds to thousands of proteins per experiment. However, the formidable informatics challenge associated with analyzing MS data has required a wide var...
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| Format: | Online |
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The American Society for Biochemistry and Molecular Biology
2012
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| Online Access: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518119/ |
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pubmed-35181192012-12-10 File Formats Commonly Used in Mass Spectrometry Proteomics* Deutsch, Eric W. Review The application of mass spectrometry (MS) to the analysis of proteomes has enabled the high-throughput identification and abundance measurement of hundreds to thousands of proteins per experiment. However, the formidable informatics challenge associated with analyzing MS data has required a wide variety of data file formats to encode the complex data types associated with MS workflows. These formats encompass the encoding of input instruction for instruments, output products of the instruments, and several levels of information and results used by and produced by the informatics analysis tools. A brief overview of the most common file formats in use today is presented here, along with a discussion of related topics. The American Society for Biochemistry and Molecular Biology 2012-12 2012-09-06 /pmc/articles/PMC3518119/ /pubmed/22956731 http://dx.doi.org/10.1074/mcp.R112.019695 Text en © 2012 by The American Society for Biochemistry and Molecular Biology, Inc. Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) applies to Author Choice Articles |
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Open Access Journal |
| institution_category |
Foreign Institution |
| institution |
US National Center for Biotechnology Information |
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NCBI PubMed |
| collection |
Online Access |
| language |
English |
| format |
Online |
| author |
Deutsch, Eric W. |
| spellingShingle |
Deutsch, Eric W. File Formats Commonly Used in Mass Spectrometry Proteomics* |
| author_facet |
Deutsch, Eric W. |
| author_sort |
Deutsch, Eric W. |
| title |
File Formats Commonly Used in Mass Spectrometry Proteomics* |
| title_short |
File Formats Commonly Used in Mass Spectrometry Proteomics* |
| title_full |
File Formats Commonly Used in Mass Spectrometry Proteomics* |
| title_fullStr |
File Formats Commonly Used in Mass Spectrometry Proteomics* |
| title_full_unstemmed |
File Formats Commonly Used in Mass Spectrometry Proteomics* |
| title_sort |
file formats commonly used in mass spectrometry proteomics* |
| description |
The application of mass spectrometry (MS) to the analysis of proteomes has enabled the high-throughput identification and abundance measurement of hundreds to thousands of proteins per experiment. However, the formidable informatics challenge associated with analyzing MS data has required a wide variety of data file formats to encode the complex data types associated with MS workflows. These formats encompass the encoding of input instruction for instruments, output products of the instruments, and several levels of information and results used by and produced by the informatics analysis tools. A brief overview of the most common file formats in use today is presented here, along with a discussion of related topics. |
| publisher |
The American Society for Biochemistry and Molecular Biology |
| publishDate |
2012 |
| url |
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518119/ |
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1611939173012340736 |