A survey of statistical software for analysing RNA-seq data

High-throughput RNA sequencing is rapidly emerging as a favourite method for gene expression studies. We review three software packages -- edgeR, DEGseq and baySeq -- from Bioconductor http://bioconductor.org for analysing RNA-sequencing data. We focus on three aspects: normalisation, statistical mo...

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Bibliographic Details
Main Authors: Gao, Dexiang, Kim, Jihye, Kim, Hyunmin, Phang, Tzu L, Selby, Heather, Tan, Aik Choon, Tong, Tiejun
Format: Online
Language:English
Published: BioMed Central 2010
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3500157/