Genome-Scale Reconstruction and Analysis of the Metabolic Network in the Hyperthermophilic Archaeon Sulfolobus Solfataricus

Genome-Scale Reconstruction and Analysis of the Metabolic Network in the Hyperthermophilic Archaeon Sulfolobus Solfataricus

We describe the reconstruction of a genome-scale metabolic model of the crenarchaeon Sulfolobus solfataricus, a hyperthermoacidophilic microorganism. It grows in terrestrial volcanic hot springs with growth occurring at pH 2–4 (optimum 3.5) and a temperature of 75–80°C (optimum 80°C). The genome of...

Full description

Bibliographic Details
Main Authors:	Ulas, Thomas, Riemer, S. Alexander, Zaparty, Melanie, Siebers, Bettina, Schomburg, Dietmar
Format:	Online
Language:	English
Published:	Public Library of Science 2012
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3432047/

Similar Items

Identification and Characterization of Small RNAs in the Hyperthermophilic Archaeon Sulfolobus solfataricus
by: Xu, Ning, et al.
Published: (2012)

Antisense regulation by transposon-derived RNAs in the hyperthermophilic archaeon Sulfolobus solfataricus
by: Märtens, Birgit, et al.
Published: (2013)

Template-dependent polymerization across discontinuous templates by the heterodimeric primase from the hyperthermophilic archaeon Sulfolobus solfataricus
by: Hu, Jinchuan, et al.
Published: (2012)

Insight into the cellular involvement of the two reverse gyrases from the hyperthermophilic archaeon Sulfolobus solfataricus
by: Couturier, Mohea, et al.
Published: (2014)

CRISPR-mediated targeted mRNA degradation in the archaeon Sulfolobus solfataricus
by: Zebec, Ziga, et al.
Published: (2014)

Thermotolerance and molecular chaperone function of the small heat shock protein HSP20 from hyperthermophilic archaeon, Sulfolobus solfataricus P2
by: Li, Dong-Chol, et al.
Published: (2011)

Biochemical, Transcriptional and Translational Evidences of the Phenol-meta-Degradation Pathway by the Hyperthermophilic Sulfolobus solfataricus 98/2
by: Comte, Alexia, et al.
Published: (2013)

Selective degradation of reverse gyrase and DNA fragmentation induced by alkylating agent in the archaeon Sulfolobus solfataricus
by: Valenti, Anna, et al.
Published: (2006)

Functional analysis of the translation factor aIF2/5B in the thermophilic archaeon Sulfolobus solfataricus
by: Maone, Enzo, et al.
Published: (2007)

Redox stress proteins are involved in adaptation response of the hyperthermoacidophilic archaeon Sulfolobus solfataricus to nickel challenge
by: Salzano, Anna M, et al.
Published: (2007)

Unexpectedly broad target recognition of the CRISPR-mediated virus defence system in the archaeon Sulfolobus solfataricus
by: Manica, Andrea, et al.
Published: (2013)

Isolation of Extracellular Polymeric Substances from Biofilms of the Thermoacidophilic Archaeon Sulfolobus acidocaldarius
by: Jachlewski, Silke, et al.
Published: (2015)

Structure of the heterotrimeric PCNA from Sulfolobus solfataricus
by: Williams, Gareth J., et al.
Published: (2006)

Heteroduplex Formation, Mismatch Resolution, and Genetic Sectoring During Homologous Recombination in the Hyperthermophilic Archaeon Sulfolobus Acidocaldarius
by: Mao, Dominic, et al.
Published: (2012)

Genomics and genetics of Sulfolobus islandicus LAL14/1, a model hyperthermophilic archaeon
by: Jaubert, Carole, et al.
Published: (2013)

The First Prokaryotic Trehalose Synthase Complex Identified in the Hyperthermophilic Crenarchaeon Thermoproteus tenax
by: Zaparty, Melanie, et al.
Published: (2013)

Global analysis of mRNA stability in the archaeon Sulfolobus
by: Andersson, Anders F, et al.
Published: (2006)

Virus-Induced Dormancy in the Archaeon Sulfolobus islandicus
by: Bautista, Maria A., et al.
Published: (2015)

Bypass of Aflatoxin B1 Adducts by the Sulfolobus solfataricus DNA Polymerase IV
by: Banerjee, Surajit, et al.
Published: (2011)

Membrane Association and Catabolite Repression of the Sulfolobus solfataricus α-Amylase
by: Soo, Edith, et al.
Published: (2015)

Harnessing hyperthermostable lactonase from Sulfolobus solfataricus for biotechnological applications
by: Rémy, Benjamin, et al.
Published: (2016)

Complete Genome Sequence of Sulfolobus solfataricus Strain 98/2 and Evolved Derivatives
by: McCarthy, Samuel, et al.
Published: (2015)

Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis
by: Jäger, Dominik, et al.
Published: (2014)

Mutational Analyses of the Enzymes Involved in the Metabolism of Hydrogen by the Hyperthermophilic Archaeon Pyrococcus furiosus
by: Schut, Gerrit J., et al.
Published: (2012)

A metabolite-centric view on flux distributions in genome-scale metabolic models
by: Riemer, S Alexander, et al.
Published: (2013)

Glycerate kinase of the hyperthermophilic archaeon Thermoproteus tenax: new insights into the phylogenetic distribution and physiological role of members of the three different glycerate kinase classes
by: Kehrer, Daniel, et al.
Published: (2007)

Functional interaction of reverse gyrase with single-strand binding protein of the archaeon Sulfolobus
by: Napoli, Alessandra, et al.
Published: (2005)

Small multicopy, non-integrative shuttle vectors based on the plasmid pRN1 for Sulfolobus acidocaldarius and Sulfolobus solfataricus, model organisms of the (cren-)archaea
by: Berkner, Silvia, et al.
Published: (2007)

A spreadable, non-integrative and high copy number shuttle vector for Sulfolobus solfataricus based on the genetic element pSSVx from Sulfolobus islandicus
by: Aucelli, Tiziana, et al.
Published: (2006)

Protein-protein interactions of the hyperthermophilic archaeon Pyrococcus horikoshii OT3
by: Usui, Kengo, et al.
Published: (2005)

Engineering a Hyperthermophilic Archaeon for Temperature-Dependent Product Formation
by: Basen, Mirko, et al.
Published: (2012)

RNA at 92°C: The non-coding transcriptome of the hyperthermophilic archaeon Pyrococcus abyssi
by: Toffano-Nioche, Claire, et al.
Published: (2013)

Experimental and computational analysis of the secretome of the hyperthermophilic archaeon Pyrococcus furiosus
by: Schmid, G., et al.
Published: (2013)

The chromosome copy number of the hyperthermophilic archaeon Thermococcus kodakarensis KOD1
by: Spaans, Sebastiaan K., et al.
Published: (2015)

Membrane homeoviscous adaptation in the piezo-hyperthermophilic archaeon Thermococcus barophilus
by: Cario, Anaïs, et al.
Published: (2015)

The genome-scale DNA-binding profile of BarR, a β-alanine responsive transcription factor in the archaeon Sulfolobus acidocaldarius
by: Liu, Han, et al.
Published: (2016)

The Sulfolobus solfataricus radA paralogue sso0777 is DNA damage inducible and positively regulated by the Sta1 protein
by: Abella, Marc, et al.
Published: (2007)

Overexpression, purification, crystallization and data collection of Sulfolobus solfataricus Sso6206, a novel highly conserved protein
by: McEwan, Andrew R., et al.
Published: (2006)

Identification and Characterisation of a Novel Acylpeptide Hydrolase from Sulfolobus Solfataricus: Structural and Functional Insights
by: Gogliettino, Marta, et al.
Published: (2012)

Back to translation: removal of aIF2 from the 5′-end of mRNAs by translation recovery factor in the crenarchaeon Sulfolobus solfataricus
by: Märtens, Birgit, et al.
Published: (2014)