jpHMM: recombination analysis in viruses with circular genomes such as the hepatitis B virus

jpHMM is a very accurate and widely used tool for recombination detection in genomic sequences of HIV-1. Here, we present an extension of jpHMM to analyze recombinations in viruses with circular genomes such as the hepatitis B virus (HBV). Sequence analysis of circular genomes is usually performed o...

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Bibliographic Details
Main Authors: Schultz, Anne-Kathrin, Bulla, Ingo, Abdou-Chekaraou, Mariama, Gordien, Emmanuel, Morgenstern, Burkhard, Zoaulim, Fabien, Dény, Paul, Stanke, Mario
Format: Online
Language:English
Published: Oxford University Press 2012
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3394342/