ProMEX – a mass spectral reference database for plant proteomics

ProMEX – a mass spectral reference database for plant proteomics

The ProMEX database is one of the main collection of annotated tryptic peptides in plant proteomics. The main objective of the ProMEX database is to provide experimental MS/MS-based information for cell type-specific or sub-cellular proteomes in Arabidopsis thaliana, Medicago truncatula, Chlamydomon...

Full description

Bibliographic Details
Main Authors: Wienkoop, Stefanie, Staudinger, Christiana, Hoehenwarter, Wolfgang, Weckwerth, Wolfram, Egelhofer, Volker
Format: Online
Language:English
Published: Frontiers Research Foundation 2012
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368217/
id pubmed-3368217
recordtype oai_dc
spelling pubmed-33682172012-06-08 ProMEX – a mass spectral reference database for plant proteomics Wienkoop, Stefanie Staudinger, Christiana Hoehenwarter, Wolfgang Weckwerth, Wolfram Egelhofer, Volker Plant Science The ProMEX database is one of the main collection of annotated tryptic peptides in plant proteomics. The main objective of the ProMEX database is to provide experimental MS/MS-based information for cell type-specific or sub-cellular proteomes in Arabidopsis thaliana, Medicago truncatula, Chlamydomonas reinhardtii, Lotus japonicus, Lotus corniculatus, Phaseolus vulgaris, Lycopersicon esculentum, Solanum tuberosum, Nicotiana tabacum, Glycine max, Zea mays, Bradyrhizobium japonicum, and Sinorhizobium meliloti. Direct links at the protein level to the most relevant databases are present in ProMEX. Furthermore, the spectral sequence information are linked to their respective pathways and can be viewed in pathway maps. Frontiers Research Foundation 2012-06-06 /pmc/articles/PMC3368217/ /pubmed/22685450 http://dx.doi.org/10.3389/fpls.2012.00125 Text en Copyright © Wienkoop, Staudinger, Hoehenwarter, Weckwerth and Egelhofer. http://www.frontiersin.org/licenseagreement This is an open-access article distributed under the terms of the Creative Commons Attribution Non Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) , which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited.
repository_type Open Access Journal
institution_category Foreign Institution
institution US National Center for Biotechnology Information
building NCBI PubMed
collection Online Access
language English
format Online
author Wienkoop, Stefanie
Staudinger, Christiana
Hoehenwarter, Wolfgang
Weckwerth, Wolfram
Egelhofer, Volker
spellingShingle Wienkoop, Stefanie
Staudinger, Christiana
Hoehenwarter, Wolfgang
Weckwerth, Wolfram
Egelhofer, Volker
ProMEX – a mass spectral reference database for plant proteomics
author_facet Wienkoop, Stefanie
Staudinger, Christiana
Hoehenwarter, Wolfgang
Weckwerth, Wolfram
Egelhofer, Volker
author_sort Wienkoop, Stefanie
title ProMEX – a mass spectral reference database for plant proteomics
title_short ProMEX – a mass spectral reference database for plant proteomics
title_full ProMEX – a mass spectral reference database for plant proteomics
title_fullStr ProMEX – a mass spectral reference database for plant proteomics
title_full_unstemmed ProMEX – a mass spectral reference database for plant proteomics
title_sort promex – a mass spectral reference database for plant proteomics
description The ProMEX database is one of the main collection of annotated tryptic peptides in plant proteomics. The main objective of the ProMEX database is to provide experimental MS/MS-based information for cell type-specific or sub-cellular proteomes in Arabidopsis thaliana, Medicago truncatula, Chlamydomonas reinhardtii, Lotus japonicus, Lotus corniculatus, Phaseolus vulgaris, Lycopersicon esculentum, Solanum tuberosum, Nicotiana tabacum, Glycine max, Zea mays, Bradyrhizobium japonicum, and Sinorhizobium meliloti. Direct links at the protein level to the most relevant databases are present in ProMEX. Furthermore, the spectral sequence information are linked to their respective pathways and can be viewed in pathway maps.
publisher Frontiers Research Foundation
publishDate 2012
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368217/
_version_ 1611534855254835200

Similar Items