A highly efficient and effective motif discovery method for ChIP-seq/ChIP-chip data using positional information

Identification of DNA motifs from ChIP-seq/ChIP-chip [chromatin immunoprecipitation (ChIP)] data is a powerful method for understanding the transcriptional regulatory network. However, most established methods are designed for small sample sizes and are inefficient for ChIP data. Here we propose a n...

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Bibliographic Details
Main Authors: Ma, Xiaotu, Kulkarni, Ashwinikumar, Zhang, Zhihua, Xuan, Zhenyu, Serfling, Robert, Zhang, Michael Q.
Format: Online
Language:English
Published: Oxford University Press 2012
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3326300/