ProtQuant: a tool for the label-free quantification of MudPIT proteomics data

ProtQuant: a tool for the label-free quantification of MudPIT proteomics data

Bibliographic Details
Main Authors:	Bridges, Susan M, Magee, G Bryce, Wang, Nan, Williams, W Paul, Burgess, Shane C, Nanduri, Bindu
Format:	Online
Language:	English
Published:	BioMed Central 2007
Online Access:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2099493/

Similar Items

Availability of MudPIT data for classification of biological samples
by: Silvestre, Dario Di, et al.
Published: (2013)

MudPIT Profiling Reveals a Link between Anaerobic Metabolism and the Alkaline Adaptive Response of Listeria monocytogenes EGD-e
by: Nilsson, Rolf E., et al.
Published: (2013)

freeQuant: A Mass Spectrometry Label-Free Quantification Software Tool for Complex Proteome Analysis
by: Deng, Ning, et al.
Published: (2015)

PSEA-Quant: A Protein Set Enrichment Analysis on Label-Free and Label-Based Protein Quantification Data
by: Lavallée-Adam, Mathieu, et al.
Published: (2014)

An automated proteomic data analysis workflow for mass spectrometry
by: Pendarvis, Ken, et al.
Published: (2009)

Prediction of peptides observable by mass spectrometry applied at the experimental set level
by: Sanders, William S, et al.
Published: (2007)

Minimizing proteome redundancy in the UniProt Knowledgebase
by: Bursteinas, Borisas, et al.
Published: (2016)

The UniProtKB guide to the human proteome
by: Breuza, Lionel, et al.
Published: (2016)

RaftProt: mammalian lipid raft proteome database
by: Shah, Anup, et al.
Published: (2015)

Visualization of LC‐MS/MS proteomics data in MaxQuant
by: Tyanova, Stefka, et al.
Published: (2015)

MaxReport: An Enhanced Proteomic Result Reporting Tool for MaxQuant
by: Zhou, Tao, et al.
Published: (2016)

The jmzQuantML programming interface and validator for the mzQuantML data standard
by: Qi, Da, et al.
Published: (2014)

TAAPP: Tiling Array Analysis Pipeline for Prokaryotes
by: Kumar, Ranjit, et al.
Published: (2011)

TLM-Quant: An Open-Source Pipeline for Visualization and Quantification of Gene Expression Heterogeneity in Growing Microbial Cells
by: Piersma, Sjouke, et al.
Published: (2013)

quantGenius: implementation of a decision support system for qPCR-based gene quantification
by: Špela Baebler, et al.
Published: (2017-05-01)

Comprehensive proteomic analysis of bovine spermatozoa of varying fertility rates and identification of biomarkers associated with fertility
by: Peddinti, Divyaswetha, et al.
Published: (2008)

O18Quant: A Semiautomatic Strategy for Quantitative Analysis of High-Resolution 16O/18O Labeled Data
by: Guo, Yan, et al.
Published: (2014)

Quantitative Cross-linking/Mass Spectrometry Using Isotope-labeled Cross-linkers and MaxQuant*
by: Chen, Zhuo A., et al.
Published: (2016)

The Universal Protein Resource (UniProt)
Published: (2008)

GlyProt: in silico glycosylation of proteins
by: Bohne-Lang, Andreas, et al.
Published: (2005)

DisProt: the Database of Disordered Proteins
by: Sickmeier, Megan, et al.
Published: (2007)

The Universal Protein Resource (UniProt)
Published: (2007)

The Universal Protein Resource (UniProt)
by: Bairoch, Amos, et al.
Published: (2005)

Forces Driving the Morphological Evolution of a Mud-Capped Dredge Pit, Northern Gulf of Mexico
by: Jiaze Wang, et al.
Published: (2018-07-01)

AgBase: a unified resource for functional analysis in agriculture
by: McCarthy, Fiona M., et al.
Published: (2007)

UniProtKB amid the turmoil of plant proteomics research
by: Schneider, Michel, et al.
Published: (2012)

WallProtDB, a database resource for plant cell wall proteomics
by: San Clemente, Hélène, et al.
Published: (2015)

Isobaric Labeling-Based Relative Quantification in Shotgun Proteomics
by: Rauniyar, Navin, et al.
Published: (2014)

AgBase: a functional genomics resource for agriculture
by: McCarthy, Fiona M, et al.
Published: (2006)

ENZYMAP: Exploiting Protein Annotation for Modeling and Predicting EC Number Changes in UniProt/Swiss-Prot
by: Silveira, Sabrina de Azevedo, et al.
Published: (2014)

UniProt-DAAC: domain architecture alignment and classification, a new method for automatic functional annotation in UniProtKB
by: Doğan, Tunca, et al.
Published: (2016)

Genetic Variations and Diseases in UniProtKB/Swiss-Prot: The Ins and Outs of Expert Manual Curation
by: Famiglietti, Maria Livia, et al.
Published: (2014)

NeuriteQuant: An open source toolkit for high content screens of neuronal Morphogenesis
by: Dehmelt, Leif, et al.
Published: (2011)

Automated QuantMap for rapid quantitative molecular network topology analysis
by: Schaal, Wesley, et al.
Published: (2013)

QuantWorm: A Comprehensive Software Package for Caenorhabditis elegans Phenotypic Assays
by: Jung, Sang-Kyu, et al.
Published: (2014)

StrigoQuant: A genetically encoded biosensor for quantifying strigolactone activity and specificity
by: Samodelov, Sophia L., et al.
Published: (2016)

Representation of selected-reaction monitoring data in the mzQuantML data standard
by: Qi, Da, et al.
Published: (2015)

UniQuant advanced X-ray fluorescence spectrometry solution
Published: (2010)

The UniProt-GO Annotation database in 2011
by: Dimmer, Emily C., et al.
Published: (2012)

iProt – A Data Warehouse For Protein Database.
by: Jaya, M.I., et al.
Published: (2007)