Metatranscriptomic analysis of diverse microbial communities reveals core metabolic pathways and microbiome-specific functionality

by Jiang, Yue, Xiong, Xuejian, Danska, Jayne, Parkinson, John
Published 2016

PhyloPro2.0: a database for the dynamic exploration of phylogenetically conserved proteins and their domain architectures across the Eukarya

by Cromar, Graham L., Zhao, Anthony, Xiong, Xuejian, Swapna, Lakshmipuram S., Loughran, Noeleen, Song, Hongyan, Parkinson, John
Published 2016

New Tricks for “Old” Domains: How Novel Architectures and Promiscuous Hubs Contributed to the Organization and Evolution of the ECM

by Cromar, Graham, Wong, Ka-Chun, Loughran, Noeleen, On, Tuan, Song, Hongyan, Xiong, Xuejian, Zhang, Zhaolei, Parkinson, John
Published 2014

Generation and Analysis of a Mouse Intestinal Metatranscriptome through Illumina Based RNA-Sequencing

by Xiong, Xuejian, Frank, Daniel N., Robertson, Charles E., Hung, Stacy S., Markle, Janet, Canty, Angelo J., McCoy, Kathy D., Macpherson, Andrew J., Poussier, Philippe, Danska, Jayne S., Parkinson, John
Published 2012

Identification of a Functional Connectome for Long-Term Fear Memory in Mice

by Wheeler, Anne L., Teixeira, Cátia M., Wang, Afra H., Xiong, Xuejian, Kovacevic, Natasa, Lerch, Jason P., McIntosh, Anthony R., Parkinson, John, Frankland, Paul W.
Published 2013

Correction: Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis

by Zhang, Yuanhao, Rowehl, Leahana, Krumsiek, Julia M., Orner, Erika P., Shaikh, Nurmohammad, Tarr, Phillip I., Sodergren, Erica, Weinstock, George M., Boedeker, Edgar C., Xiong, Xuejian, Parkinson, John, Frank, Daniel N., Li, Ellen, Gathungu, Grace
Published 2015

Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis

by Zhang, Yuanhao, Rowehl, Leahana, Krumsiek, Julia M., Orner, Erika P., Shaikh, Nurmohammad, Tarr, Phillip I., Sodergren, Erica, Weinstock, George M., Boedeker, Edgar C., Xiong, Xuejian, Parkinson, John, Frank, Daniel N., Li, Ellen, Gathungu, Grace
Published 2015

Genetic Interaction Maps in Escherichia coli Reveal Functional Crosstalk among Cell Envelope Biogenesis Pathways

by Babu, Mohan, Díaz-Mejía, J. Javier, Vlasblom, James, Gagarinova, Alla, Phanse, Sadhna, Graham, Chris, Yousif, Fouad, Ding, Huiming, Xiong, Xuejian, Nazarians-Armavil, Anaies, Alamgir, Md, Ali, Mehrab, Pogoutse, Oxana, Pe'er, Asaf, Arnold, Roland, Michaut, Magali, Parkinson, John, Golshani, Ashkan, Whitfield, Chris, Wodak, Shoshana J., Moreno-Hagelsieb, Gabriel, Greenblatt, Jack F., Emili, Andrew
Published 2011

Panorama of ancient metazoan macromolecular complexes

by Wan, Cuihong, Borgeson, Blake, Phanse, Sadhna, Tu, Fan, Drew, Kevin, Clark, Greg, Xiong, Xuejian, Kagan, Olga, Kwan, Julian, Berzginov, Alexandr, Chessman, Kyle, Pal, Swati, Cromar, Graham, Papoulas, Ophelia, Ni, Zuyao, Boutz, Daniel R., Stoilova, Snejana, Havugimana, Pierre C., Guo, Xinghua, Malty, Ramy H., Sarov, Mihail, Greenblatt, Jack, Babu, Mohan, Derry, Brent, Tillier, Elisabeth, Wallingford, John B., Parkinson, John, Marcotte, Edward M., Emili, Andrew
Published 2015

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

by Phanse, Sadhna, Wan, Cuihong, Borgeson, Blake, Tu, Fan, Drew, Kevin, Clark, Greg, Xiong, Xuejian, Kagan, Olga, Kwan, Julian, Bezginov, Alexandr, Chessman, Kyle, Pal, Swati, Cromar, Graham, Papoulas, Ophelia, Ni, Zuyao, Boutz, Daniel R., Stoilova, Snejana, Havugimana, Pierre C., Guo, Xinghua, Malty, Ramy H., Sarov, Mihail, Greenblatt, Jack, Babu, Mohan, Derry, W. Brent, Tillier, Elisabeth R., Wallingford, John B., Parkinson, John, Marcotte, Edward M., Emili, Andrew
Published 2015