Protein Amino Acid Composition: A Genomic Signature of Encephalization in Mammals

by Gutierrez, Humberto, Castillo, Atahualpa, Monzon, Jimena, Urrutia, Araxi O.
Published 2011

Increased levels of noisy splicing in cancers, but not for oncogene-derived transcripts

by Chen, Lu, Tovar-Corona, Jaime M., Urrutia, Araxi O.
Published 2011

Alternative Splicing: A Potential Source of Functional Innovation in the Eukaryotic Genome

by Chen, Lu, Tovar-Corona, Jaime M., Urrutia, Araxi O.
Published 2012

Lineage-specific sequence evolution and exon edge conservation partially explain the relationship between evolutionary rate and expression level in A. thaliana

by Bush, Stephen J, Kover, Paula X, Urrutia, Araxi O
Published 2015

Splicing and the Evolution of Proteins in Mammals

by Parmley, Joanna L, Urrutia, Araxi O, Potrzebowski, Lukasz, Kaessmann, Henrik, Hurst, Laurence D
Published 2007

Increased brain size in mammals is associated with size variations in gene families with cell signalling, chemotaxis and immune-related functions

by Castillo-Morales, Atahualpa, Monzón-Sandoval, Jimena, Urrutia, Araxi O., Gutiérrez, Humberto
Published 2014

Correcting for Differential Transcript Coverage Reveals a Strong Relationship between Alternative Splicing and Organism Complexity

by Chen, Lu, Bush, Stephen J., Tovar-Corona, Jaime M., Castillo-Morales, Atahualpa, Urrutia, Araxi O.
Published 2014

Modular reorganization of the global network of gene regulatory interactions during perinatal human brain development

by Monzón-Sandoval, Jimena, Castillo-Morales, Atahualpa, Urrutia, Araxi O., Gutierrez, Humberto
Published 2016

Neocortex expansion is linked to size variations in gene families with chemotaxis, cell–cell signalling and immune response functions in mammals

by Castillo-Morales, Atahualpa, Monzón-Sandoval, Jimena, de Sousa, Alexandra A., Urrutia, Araxi O., Gutierrez, Humberto
Published 2016

Evidence for Deep Phylogenetic Conservation of Exonic Splice-Related Constraints: Splice-Related Skews at Exonic Ends in the Brown Alga Ectocarpus Are Common and Resemble Those See...

by Wu, XianMing, Tronholm, Ana, Cáceres, Eva Fernández, Tovar-Corona, Jaime M., Chen, Lu, Urrutia, Araxi O., Hurst, Laurence D.
Published 2013

Genes That Escape X-Inactivation in Humans Have High Intraspecific Variability in Expression, Are Associated with Mental Impairment but Are Not Slow Evolving

by Zhang, Yuchao, Castillo-Morales, Atahualpa, Jiang, Min, Zhu, Yufei, Hu, Landian, Urrutia, Araxi O., Kong, Xiangyin, Hurst, Laurence D.
Published 2013

Presence–Absence Variation in A. thaliana Is Primarily Associated with Genomic Signatures Consistent with Relaxed Selective Constraints

by Bush, Stephen J., Castillo-Morales, Atahualpa, Tovar-Corona, Jaime M., Chen, Lu, Kover, Paula X., Urrutia, Araxi O.
Published 2014

Genes that Escape X-Inactivation in Humans Have High Intraspecific Variability in Expression, Are Associated with Mental Impairment but Are Not Slow Evolving

by Zhang, Yuchao, Castillo-Morales, Atahualpa, Jiang, Min, Zhu, Yufei, Hu, Landian, Urrutia, Araxi O., Kong, Xiangyin, Hurst, Laurence D.
Published 2016

Optimization of next‐generation sequencing transcriptome annotation for species lacking sequenced genomes

by Ockendon, Nina F., O'Connell, Lauren A., Bush, Stephen J., Monzón‐Sandoval, Jimena, Barnes, Holly, Székely, Tamás, Hofmann, Hans A., Dorus, Steve, Urrutia, Araxi O.
Published 2015

Alternative Splice in Alternative Lice

by Tovar-Corona, Jaime M., Castillo-Morales, Atahualpa, Chen, Lu, Olds, Brett P., Clark, John M., Reynolds, Stuart E., Pittendrigh, Barry R., Feil, Edward J., Urrutia, Araxi O.
Published 2015