Benchmarking AMBER Force Fields for RNA: Comparisons to NMR Spectra for Single-Stranded r(GACC) Are Improved by Revised χ Torsions

by Yildirim, Ilyas, Stern, Harry A., Tubbs, Jason D., Kennedy, Scott D., Turner, Douglas H.
Published 2011

Correction to NMR of CCCC RNA Reveals a Right-Handed Helix and Revised Parameters for AMBER Force Field Torsions Improve Structural Predictions from Molecular Dynamics

by Tubbs, Jason D., Condon, David E., Kennedy, Scott D., Hauser, Melanie, Bevilacqua, Philip C., Turner, Douglas H.
Published 2013

The Nuclear Magnetic Resonance of CCCC RNA Reveals a Right-Handed Helix, and Revised Parameters for AMBER Force Field Torsions Improve Structural Predictions from Molecular Dynamic...

by Tubbs, Jason D., Condon, David E., Kennedy, Scott D., Hauser, Melanie, Bevilacqua, Philip C., Turner, Douglas H.
Published 2013

Nuclear Magnetic Resonance-Assisted Prediction of Secondary Structure for RNA: Incorporation of Direction-Dependent Chemical Shift Constraints

by Chen, Jonathan L., Bellaousov, Stanislav, Tubbs, Jason D., Kennedy, Scott D., Lopez, Michael J., Mathews, David H., Turner, Douglas H.
Published 2015