Detecting concept mentions in biomedical text using hidden Markov model: multiple concept types at once or one at a time?

by Torii, Manabu, Wagholikar, Kavishwar, Liu, Hongfang
Published 2014

Feasibility of pooling annotated corpora for clinical concept extraction

by Wagholikar, Kavishwar, Torii, Manabu, Jonnalagadda, Siddhartha, Liu, Hongfang
Published 2012

Pooling annotated corpora for clinical concept extraction

by Wagholikar, Kavishwar B, Torii, Manabu, Jonnalagadda, Siddhartha R, Liu, Hongfang
Published 2013

A generalizable NLP framework for fast development of pattern-based biomedical relation extraction systems

by Peng, Yifan, Torii, Manabu, Wu, Cathy H, Vijay-Shanker, K
Published 2014

A comparison study on algorithms of detecting long forms for short forms in biomedical text

by Torii, Manabu, Hu, Zhang-zhi, Song, Min, Wu, Cathy H, Liu, Hongfang
Published 2007

dbOGAP - An Integrated Bioinformatics Resource for Protein O-GlcNAcylation

by Wang, Jinlian, Torii, Manabu, Liu, Hongfang, Hart, Gerald W, Hu, Zhang-Zhi
Published 2011

A Hybrid Approach to Sentiment Sentence Classification in Suicide Notes

by Sohn, Sunghwan, Torii, Manabu, Li, Dingcheng, Wagholikar, Kavishwar, Wu, Stephen, Liu, Hongfang
Published 2012

iSimp in BioC standard format: enhancing the interoperability of a sentence simplification system

by Peng, Yifan, Tudor, Catalina O., Torii, Manabu, Wu, Cathy H., Vijay-Shanker, K.
Published 2014

Mining Health-Related Issues in Consumer Product Reviews by Using Scalable Text Analytics

by Torii, Manabu, Tilak, Sameer S., Doan, Son, Zisook, Daniel S., Fan, Jung-wei
Published 2016

A framework for biomedical figure segmentation towards image-based document retrieval

by Lopez, Luis D, Yu, Jingyi, Arighi, Cecilia, Tudor, Catalina O, Torii, Manabu, Huang, Hongzhan, Vijay-Shanker, K, Wu, Cathy
Published 2013

RLIMS-P: an online text-mining tool for literature-based extraction of protein phosphorylation information

by Torii, Manabu, Li, Gang, Li, Zhiwen, Oughtred, Rose, Diella, Francesca, Çelen, Irem, Arighi, Cecilia N., Huang, Hongzhan, Vijay-Shanker, K., Wu, Cathy H.
Published 2014

BioC: a minimalist approach to interoperability for biomedical text processing

by Comeau, Donald C., Islamaj Doğan, Rezarta, Ciccarese, Paolo, Cohen, Kevin Bretonnel, Krallinger, Martin, Leitner, Florian, Lu, Zhiyong, Peng, Yifan, Rinaldi, Fabio, Torii, Manabu, Valencia, Alfonso, Verspoor, Karin, Wiegers, Thomas C., Wu, Cathy H., Wilbur, W. John
Published 2013

The gene normalization task in BioCreative III

by Lu, Zhiyong, Kao, Hung-Yu, Wei, Chih-Hsuan, Huang, Minlie, Liu, Jingchen, Kuo, Cheng-Ju, Hsu, Chun-Nan, Tsai, Richard Tzong-Han, Dai, Hong-Jie, Okazaki, Naoaki, Cho, Han-Cheol, Gerner, Martin, Solt, Illes, Agarwal, Shashank, Liu, Feifan, Vishnyakova, Dina, Ruch, Patrick, Romacker, Martin, Rinaldi, Fabio, Bhattacharya, Sanmitra, Srinivasan, Padmini, Liu, Hongfang, Torii, Manabu, Matos, Sergio, Campos, David, Verspoor, Karin, Livingston, Kevin M, Wilbur, W John
Published 2011