Combined Model of Intrinsic and Extrinsic Variability for Computational Network Design with Application to Synthetic Biology

by Toni, Tina, Tidor, Bruce
Published 2013

Rational Approaches to Improving Selectivity in Drug Design

by Huggins, David J., Sherman, Woody, Tidor, Bruce
Published 2012

Modeling Stem Cell Induction Processes

by Grácio, Filipe, Cabral, Joaquim, Tidor, Bruce
Published 2013

Charge Optimization Theory for Induced-Fit Ligands

by Shen, Yang, Gilson, Michael K., Tidor, Bruce
Published 2012

The Per2 Negative Feedback Loop Sets the Period in the Mammalian Circadian Clock Mechanism

by Wilkins, A. Katharina, Barton, Paul I, Tidor, Bruce
Published 2007

Convergence in parameters and predictions using computational experimental design

by Hagen, David R., White, Jacob K., Tidor, Bruce
Published 2013

Modeling formalisms in Systems Biology

by Machado, Daniel, Costa, Rafael S, Rocha, Miguel, Ferreira, Eugénio C, Tidor, Bruce, Rocha, Isabel
Published 2011

Simulating EGFR-ERK Signaling Control by Scaffold Proteins KSR and MP1 Reveals Differential Ligand-Sensitivity Co-Regulated by Cbl-CIN85 and Endophilin

by Huang, Lu, Pan, Catherine Qiurong, Li, Baowen, Tucker-Kellogg, Lisa, Tidor, Bruce, Chen, Yuzong, Low, Boon Chuan
Published 2011

A Post-Synaptic Scaffold at the Origin of the Animal Kingdom

by Sakarya, Onur, Armstrong, Kathryn A., Adamska, Maja, Adamski, Marcin, Wang, I-Fan, Tidor, Bruce, Degnan, Bernard M., Oakley, Todd H., Kosik, Kenneth S.
Published 2007

Efficient Computation of Small-Molecule Configurational Binding Entropy and Free Energy Changes by Ensemble Enumeration

by Silver, Nathaniel W., King, Bracken M., Nalam, Madhavi N. L., Cao, Hong, Ali, Akbar, Kiran Kumar Reddy, G. S., Rana, Tariq M., Schiffer, Celia A., Tidor, Bruce
Published 2013

Testing the Substrate-Envelope Hypothesis with Designed Pairs of Compounds

by Shen, Yang, Altman, Michael D., Ali, Akbar, Nalam, Madhavi N. L., Cao, Hong, Rana, Tariq M., Schiffer, Celia A., Tidor, Bruce
Published 2013

Strong Enrichment of Aromatic Residues in Binding Sites from a Charge-neutralized Hyperthermostable Sso7d Scaffold Library*

by Traxlmayr, Michael W., Kiefer, Jonathan D., Srinivas, Raja R., Lobner, Elisabeth, Tisdale, Alison W., Mehta, Naveen K., Yang, Nicole J., Tidor, Bruce, Wittrup, K. Dane
Published 2016

Multilevel modeling and value of information in clinical trial decision support

by Cui, Yuanyuan, Murphy, Brendan, Gentilcore, Anastasia, Sharma, Yugal, Minasian, Lori M, Kramer, Barnett S, Coates, Paul M, Gohagan, John K, Klenk, Juergen, Tidor, Bruce
Published 2014