Species-Specific Chitin-Binding Module 18 Expansion in the Amphibian Pathogen Batrachochytrium dendrobatidis

by Abramyan, John, Stajich, Jason E.
Published 2012

Comparative genomic analysis of fungal genomes reveals intron-rich ancestors

by Stajich, Jason E, Dietrich, Fred S, Roy, Scott W
Published 2007

Comparative analysis of Saccharomyces cerevisiae WW domains and their interacting proteins

by Hesselberth, Jay R, Miller, John P, Golob, Anna, Stajich, Jason E, Michaud, Gregory A, Fields, Stanley
Published 2006

The Evolution of Mammalian Gene Families

by Demuth, Jeffery P., Bie, Tijl De, Stajich, Jason E., Cristianini, Nello, Hahn, Matthew W.
Published 2006

A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis

by Fitzpatrick, David A, Logue, Mary E, Stajich, Jason E, Butler, Geraldine
Published 2006

Genomic Transition to Pathogenicity in Chytrid Fungi

by Joneson, Suzanne, Stajich, Jason E., Shiu, Shin-Han, Rosenblum, Erica Bree
Published 2011

Sequential Utilization of Hosts from Different Fly Families by Genetically Distinct, Sympatric Populations within the Entomophthora muscae Species Complex

by Gryganskyi, Andrii P., Humber, Richard A., Stajich, Jason E., Mullens, Bradley, Anishchenko, Iryna M., Vilgalys, Rytas
Published 2013

Analyses of expressed sequence tags in Neurospora reveal rapid evolution of genes associated with the early stages of sexual reproduction in fungi

by Nygren, Kristiina, Wallberg, Andreas, Samils, Nicklas, Stajich, Jason E, Townsend, Jeffrey P, Karlsson, Magnus, Johannesson, Hanna
Published 2012

Endogenous Small RNA Mediates Meiotic Silencing of a Novel DNA Transposon

by Wang, Yizhou, Smith, Kristina M., Taylor, John W., Freitag, Michael, Stajich, Jason E.
Published 2015

MicroRNAs Suppress NB Domain Genes in Tomato That Confer Resistance to Fusarium oxysporum

by Ouyang, Shouqiang, Park, Gyungsoon, Atamian, Hagop S., Han, Cliff S., Stajich, Jason E., Kaloshian, Isgouhi, Borkovich, Katherine A.
Published 2014

The Use of RelocaTE and Unassembled Short Reads to Produce High-Resolution Snapshots of Transposable Element Generated Diversity in Rice

by Robb, Sofia M. C., Lu, Lu, Valencia, Elizabeth, Burnette, James M., Okumoto, Yutaka, Wessler, Susan R., Stajich, Jason E.
Published 2013

The Genome and Development-Dependent Transcriptomes of Pyronema confluens: A Window into Fungal Evolution

by Traeger, Stefanie, Altegoer, Florian, Freitag, Michael, Gabaldon, Toni, Kempken, Frank, Kumar, Abhishek, Marcet-Houben, Marina, Pöggeler, Stefanie, Stajich, Jason E., Nowrousian, Minou
Published 2013

5'-Serial Analysis of Gene Expression studies reveal a transcriptomic switch during fruiting body development in Coprinopsis cinerea

by Cheng, Chi Keung, Au, Chun Hang, Wilke, Sarah K, Stajich, Jason E, Zolan, Miriam E, Pukkila, Patricia J, Kwan, Hoi Shan
Published 2013

Comparative genomic analysis of the ‘pseudofungus’ Hyphochytrium catenoides

by Leonard, Guy, Labarre, Aurélie, Milner, David S., Monier, Adam, Soanes, Darren, Wideman, Jeremy G., Maguire, Finlay, Stevens, Sam, Sain, Divya, Grau-Bové, Xavier, Sebé-Pedrós, Arnau, Stajich, Jason E., Paszkiewicz, Konrad, Brown, Matthew W., Hall, Neil, Wickstead, Bill, Richards, Thomas A.
Published 2018

FungiDB: an integrated functional genomics database for fungi

by Stajich, Jason E., Harris, Todd, Brunk, Brian P., Brestelli, John, Fischer, Steve, Harb, Omar S., Kissinger, Jessica C., Li, Wei, Nayak, Vishal, Pinney, Deborah F., Stoeckert, Chris J., Roos, David S.
Published 2012

Investigating hookworm genomes by comparative analysis of two Ancylostoma species

by Mitreva, Makedonka, McCarter, James P, Arasu, Prema, Hawdon, John, Martin, John, Dante, Mike, Wylie, Todd, Xu, Jian, Stajich, Jason E, Kapulkin, Wadim, Clifton, Sandra W, Waterston, Robert H, Wilson, Richard K
Published 2005

BASC: an integrated bioinformatics system for Brassica research

by Erwin, Timothy A., Jewell, Erica G., Love, Christopher G., Lim, Geraldine A. C., Li, Xi, Chapman, Ross, Batley, Jacqueline, Stajich, Jason E., Mongin, Emmanuel, Stupka, Elia, Ross, Bruce, Spangenberg, German, Edwards, David
Published 2007

Massive Changes in Genome Architecture Accompany the Transition to Self-Fertility in the Filamentous Fungus Neurospora tetrasperma

by Ellison, Christopher E., Stajich, Jason E., Jacobson, David J., Natvig, Donald O., Lapidus, Alla, Foster, Brian, Aerts, Andrea, Riley, Robert, Lindquist, Erika A., Grigoriev, Igor V., Taylor, John W.
Published 2011

MIxS-BE: a MIxS extension defining a minimum information standard for sequence data from the built environment

by Glass, Elizabeth M, Dribinsky, Yekaterina, Yilmaz, Pelin, Levin, Hal, Van Pelt, Robert, Wendel, Doug, Wilke, Andreas, Eisen, Jonathan A, Huse, Sue, Shipanova, Anna, Sogin, Mitch, Stajich, Jason, Knight, Rob, Meyer, Folker, Schriml, Lynn M
Published 2014

Transposable Elements versus the Fungal Genome: Impact on Whole-Genome Architecture and Transcriptional Profiles

by Castanera, Raúl, López-Varas, Leticia, Borgognone, Alessandra, LaButti, Kurt, Lapidus, Alla, Schmutz, Jeremy, Grimwood, Jane, Pérez, Gúmer, Pisabarro, Antonio G., Grigoriev, Igor V., Stajich, Jason E., Ramírez, Lucía
Published 2016