Cell-Type-Specific Predictive Network Yields Novel Insights into Mouse Embryonic Stem Cell Self-Renewal and Cell Fate

by Dowell, Karen G., Simons, Allen K., Wang, Zack Z., Yun, Kyuson, Hibbs, Matthew A.
Published 2013

Canonical A-to-I and C-to-U RNA Editing Is Enriched at 3′UTRs and microRNA Target Sites in Multiple Mouse Tissues

by Gu, Tongjun, Buaas, Frank W., Simons, Allen K., Ackert-Bicknell, Cheryl L., Braun, Robert E., Hibbs, Matthew A.
Published 2012

RNA-Seq Alignment to Individualized Genomes Improves Transcript Abundance Estimates in Multiparent Populations

by Munger, Steven C., Raghupathy, Narayanan, Choi, Kwangbom, Simons, Allen K., Gatti, Daniel M., Hinerfeld, Douglas A., Svenson, Karen L., Keller, Mark P., Attie, Alan D., Hibbs, Matthew A., Graber, Joel H., Chesler, Elissa J., Churchill, Gary A.
Published 2014