Shotgun sequencing of Yersinia enterocolitica strain W22703 (biotype 2, serotype O:9): genomic evidence for oscillation between invertebrates and mammals

by Fuchs, Thilo M, Brandt, Katharina, Starke, Mandy, Rattei, Thomas
Published 2011

The Genome of Nitrospina gracilis Illuminates the Metabolism and Evolution of the Major Marine Nitrite Oxidizer

by Lücker, Sebastian, Nowka, Boris, Rattei, Thomas, Spieck, Eva, Daims, Holger
Published 2013

SIMAP—the database of all-against-all protein sequence similarities and annotations with new interfaces and increased coverage

by Arnold, Roland, Goldenberg, Florian, Mewes, Hans-Werner, Rattei, Thomas
Published 2014

Prediction of microbial phenotypes based on comparative genomics

by Feldbauer, Roman, Schulz, Frederik, Horn, Matthias, Rattei, Thomas
Published 2015

probeBase—an online resource for rRNA-targeted oligonucleotide probes and primers: new features 2016

by Greuter, Daniel, Loy, Alexander, Horn, Matthias, Rattei, Thomas
Published 2016

Recombination Drives Evolution of the Clostridium difficile 16S-23S rRNA Intergenic Spacer Region

by Janezic, Sandra, Indra, Alexander, Rattei, Thomas, Weinmaier, Thomas, Rupnik, Maja
Published 2014

Complete Genome Sequence of Listeria monocytogenes Lm60, a Strain with an Enhanced Cold Adaptation Capacity

by Tasara, Taurai, Weinmaier, Thomas, Klumpp, Jochen, Rattei, Thomas, Stephan, Roger
Published 2014

Characterization of 19 new microsatellite loci for the Omani barb Garra barreimiae from 454 sequences

by Kirchner, Sandra, Weinmaier, Thomas, Rattei, Thomas, Sattmann, Helmut, Kruckenhauser, Luise
Published 2014

SIMAP: the similarity matrix of proteins

by Rattei, Thomas, Arnold, Roland, Tischler, Patrick, Lindner, Dominik, Stümpflen, Volker, Mewes, H. Werner
Published 2006

The Evolutionary Dynamics of Protein-Protein Interaction Networks Inferred from the Reconstruction of Ancient Networks

by Jin, Yuliang, Turaev, Dmitrij, Weinmaier, Thomas, Rattei, Thomas, Makse, Hernán A.
Published 2013

Complete Genome Sequence of Listeria monocytogenes LL195, a Serotype 4b Strain from the 1983–1987 Listeriosis Epidemic in Switzerland

by Weinmaier, Thomas, Riesing, Martin, Rattei, Thomas, Bille, Jacques, Arguedas-Villa, Carolina, Stephan, Roger, Tasara, Taurai
Published 2013

Metagenomic Analysis Reveals Presence of Treponema denticola in a Tissue Biopsy of the Iceman

by Maixner, Frank, Thomma, Anton, Cipollini, Giovanna, Widder, Stefanie, Rattei, Thomas, Zink, Albert
Published 2014

Transcriptome Profiling of the Endophyte Burkholderia phytofirmans PsJN Indicates Sensing of the Plant Environment and Drought Stress

by Sheibani-Tezerji, Raheleh, Rattei, Thomas, Sessitsch, Angela, Trognitz, Friederike, Mitter, Birgit
Published 2015

EffectiveDB—updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems

by Eichinger, Valerie, Nussbaumer, Thomas, Platzer, Alexander, Jehl, Marc-André, Arnold, Roland, Rattei, Thomas
Published 2016

The genomes of closely related Pantoea ananatis maize seed endophytes having different effects on the host plant differ in secretion system genes and mobile genetic elements

by Sheibani-Tezerji, Raheleh, Naveed, Muhammad, Jehl, Marc-André, Sessitsch, Angela, Rattei, Thomas, Mitter, Birgit
Published 2015

Massive Expansion of Ubiquitination-Related Gene Families within the Chlamydiae

by Domman, Daryl, Collingro, Astrid, Lagkouvardos, Ilias, Gehre, Lena, Weinmaier, Thomas, Rattei, Thomas, Subtil, Agathe, Horn, Matthias
Published 2014

Phylogenetic and environmental diversity of DsrAB-type dissimilatory (bi)sulfite reductases

by Müller, Albert Leopold, Kjeldsen, Kasper Urup, Rattei, Thomas, Pester, Michael, Loy, Alexander
Published 2015

SIMAP—structuring the network of protein similarities

by Rattei, Thomas, Tischler, Patrick, Arnold, Roland, Hamberger, Franz, Krebs, Jörg, Krumsiek, Jan, Wachinger, Benedikt, Stümpflen, Volker, Mewes, Werner
Published 2008

Genetic diversity of the obligate intracellular bacterium Chlamydophila pneumoniae by genome-wide analysis of single nucleotide polymorphisms: evidence for highly clonal population...

by Rattei, Thomas, Ott, Stephan, Gutacker, Michaela, Rupp, Jan, Maass, Matthias, Schreiber, Stefan, Solbach, Werner, Wirth, Thierry, Gieffers, Jens
Published 2007

amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions

by Pester, Michael, Rattei, Thomas, Flechl, Stefan, Gröngröft, Alexander, Richter, Andreas, Overmann, Jörg, Reinhold-Hurek, Barbara, Loy, Alexander, Wagner, Michael
Published 2012