Sequence capture by hybridization to explore modern and ancient genomic diversity in model and nonmodel organisms

by Gasc, Cyrielle, Peyretaillade, Eric, Peyret, Pierre
Published 2016

Genome Sequence of Bacillus subtilis Strain HUK15, Isolated from Hexachlorocyclohexane-Contaminated Soil

by Gasc, Cyrielle, Richard, Jean-Yves, Peyret, Pierre
Published 2016

Genome Sequence of Staphylococcus aureus Strain HUK16, Isolated from Hexachlorocyclohexane-Contaminated Soil

by Gasc, Cyrielle, Richard, Jean-Yves, Peyret, Pierre
Published 2016

Genome Sequence of Pseudomonas sp. HUK17, Isolated from Hexachlorocyclohexane-Contaminated Soil

by Gasc, Cyrielle, Richard, Jean-Yves, Peyret, Pierre
Published 2016

NucBase, an easy to use read mapper for small RNAs

by Dufourt, Jeremy, Pouchin, Pierre, Peyret, Pierre, Brasset, Emilie, Vaury, Chantal
Published 2013

Draft Genomes of Three Strains Representative of the Bacillus anthracis Diversity Found in France

by Girault, Guillaume, Parisot, Nicolas, Peyretaillade, Eric, Peyret, Pierre, Derzelle, Sylviane
Published 2014

Unique Characteristics of the Pyrrolysine System in the 7th Order of Methanogens: Implications for the Evolution of a Genetic Code Expansion Cassette

by Borrel, Guillaume, Gaci, Nadia, Peyret, Pierre, O'Toole, Paul W., Gribaldo, Simonetta, Brugère, Jean-François
Published 2014

Corrigendum to “Unique Characteristics of the Pyrrolysine System in the 7th Order of Methanogens: Implications for the Evolution of a Genetic Code Expansion Cassette”

by Borrel, Guillaume, Gaci, Nadia, Peyret, Pierre, O'Toole, Paul W., Gribaldo, Simonetta, Brugère, Jean-François
Published 2015

Large Scale Explorative Oligonucleotide Probe Selection for Thousands of Genetic Groups on a Computing Grid: Application to Phylogenetic Probe Design Using a Curated Small Subunit...

by Jaziri, Faouzi, Peyretaillade, Eric, Missaoui, Mohieddine, Parisot, Nicolas, Cipière, Sébastien, Denonfoux, Jérémie, Mahul, Antoine, Peyret, Pierre, Hill, David R. C.
Published 2014

Phylogenomic Data Support a Seventh Order of Methylotrophic Methanogens and Provide Insights into the Evolution of Methanogenesis

by Borrel, Guillaume, O’Toole, Paul W., Harris, Hugh M.B., Peyret, Pierre, Brugère, Jean-François, Gribaldo, Simonetta
Published 2013

Oral exposure to environmental pollutant benzo[a]pyrene impacts the intestinal epithelium and induces gut microbial shifts in murine model

by Ribière, Céline, Peyret, Pierre, Parisot, Nicolas, Darcha, Claude, Déchelotte, Pierre J., Barnich, Nicolas, Peyretaillade, Eric, Boucher, Delphine
Published 2016

Solution Hybrid Selection Capture for the Recovery of Functional Full-Length Eukaryotic cDNAs From Complex Environmental Samples

by Bragalini, Claudia, Ribière, Céline, Parisot, Nicolas, Vallon, Laurent, Prudent, Elsa, Peyretaillade, Eric, Girlanda, Mariangela, Peyret, Pierre, Marmeisse, Roland, Luis, Patricia
Published 2014

Gene Capture Coupled to High-Throughput Sequencing as a Strategy for Targeted Metagenome Exploration

by Denonfoux, Jérémie, Parisot, Nicolas, Dugat-Bony, Eric, Biderre-Petit, Corinne, Boucher, Delphine, Morgavi, Diego P., Le Paslier, Denis, Peyretaillade, Eric, Peyret, Pierre
Published 2013

PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification

by Jaziri, Faouzi, Parisot, Nicolas, Abid, Anis, Denonfoux, Jérémie, Ribière, Céline, Gasc, Cyrielle, Boucher, Delphine, Brugère, Jean-François, Mahul, Antoine, Hill, David R.C., Peyretaillade, Eric, Peyret, Pierre
Published 2014

The Prediction and Validation of Small CDSs Expand the Gene Repertoire of the Smallest Known Eukaryotic Genomes

by Belkorchia, Abdel, Gasc, Cyrielle, Polonais, Valérie, Parisot, Nicolas, Gallois, Nicolas, Ribière, Céline, Lerat, Emmanuelle, Gaspin, Christine, Pombert, Jean-François, Peyret, Pierre, Peyretaillade, Eric
Published 2015

Distribution of Dehalococcoidia in the Anaerobic Deep Water of a Remote Meromictic Crater Lake and Detection of Dehalococcoidia-Derived Reductive Dehalogenase Homologous Genes

by Biderre-Petit, Corinne, Dugat-Bony, Eric, Mege, Mickaël, Parisot, Nicolas, Adrian, Lorenz, Moné, Anne, Denonfoux, Jérémie, Peyretaillade, Eric, Debroas, Didier, Boucher, Delphine, Peyret, Pierre
Published 2016

Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine

by Borrel, Guillaume, Parisot, Nicolas, Harris, Hugh MB, Peyretaillade, Eric, Gaci, Nadia, Tottey, William, Bardot, Olivier, Raymann, Kasie, Gribaldo, Simonetta, Peyret, Pierre, O’Toole, Paul W, Brugère, Jean-François
Published 2014

In situ TCE degradation mediated by complex dehalorespiring communities during biostimulation processes

by Dugat‐Bony, Eric, Biderre‐Petit, Corinne, Jaziri, Faouzi, David, Maude M., Denonfoux, Jérémie, Lyon, Delina Y., Richard, Jean‐Yves, Curvers, Cyrille, Boucher, Delphine, Vogel, Timothy M., Peyretaillade, Eric, Peyret, Pierre
Published 2012

Genome Sequence of “Candidatus Methanomassiliicoccus intestinalis” Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon from Human Feces

by Borrel, Guillaume, Harris, Hugh M. B., Parisot, Nicolas, Gaci, Nadia, Tottey, William, Mihajlovski, Agnès, Deane, Jennifer, Gribaldo, Simonetta, Bardot, Olivier, Peyretaillade, Eric, Peyret, Pierre, O’Toole, Paul W., Brugère, Jean-François
Published 2013

The Human Gut Chip “HuGChip”, an Explorative Phylogenetic Microarray for Determining Gut Microbiome Diversity at Family Level

by Tottey, William, Denonfoux, Jeremie, Jaziri, Faouzi, Parisot, Nicolas, Missaoui, Mohiedine, Hill, David, Borrel, Guillaume, Peyretaillade, Eric, Alric, Monique, Harris, Hugh M. B., Jeffery, Ian B., Claesson, Marcus J., O'Toole, Paul W., Peyret, Pierre, Brugère, Jean-François
Published 2013