High-Resolution Identification of Specificity Determining Positions in the LacI Protein Family Using Ensembles of Sub-Sampled Alignments

by Sloutsky, Roman, Naegle, Kristen M.
Published 2016

Reproducible Analysis of Post-Translational Modifications in Proteomes—Application to Human Mutations

by Holehouse, Alex S., Naegle, Kristen M.
Published 2015

ProteomeScout: a repository and analysis resource for post-translational modifications and proteins

by Matlock, Matthew K., Holehouse, Alex S., Naegle, Kristen M.
Published 2015

MCAM: Multiple Clustering Analysis Methodology for Deriving Hypotheses and Insights from High-Throughput Proteomic Datasets

by Naegle, Kristen M., Welsch, Roy E., Yaffe, Michael B., White, Forest M., Lauffenburger, Douglas A.
Published 2011

Phosphoproteomics of collagen receptor networks reveals SHP-2 phosphorylation downstream of wild-type DDR2 and its lung cancer mutants

by Iwai, Leo K., Payne, Leo S., Luczynski, Maciej T., Chang, Francis, Xu, Huifang, Clinton, Ryan W., Paul, Angela, Esposito, Edward A., Gridley, Scott, Leitinger, Birgit, Naegle, Kristen M., Huang, Paul H.
Published 2013