Regulatory interplay between soybean root and soybean cyst nematode during a resistant and susceptible reaction

by Hosseini, Parsa, Matthews, Benjamin F
Published 2014

Using an ensemble of statistical metrics to quantify large sets of plant transcription factor binding sites

by Hosseini, Parsa, Ovcharenko, Ivan, Matthews, Benjamin F
Published 2013

Online Analytical Processing (OLAP): A Fast and Effective Data Mining Tool for Gene Expression Databases

by Alkharouf, Nadim W., Jamison, D. Curtis, Matthews, Benjamin F.
Published 2005

MAPT and PAICE: Tools for time series and single time point transcriptionist visualization and knowledge discovery

by Hosseini, Parsa, Tremblay, Arianne, Matthews, Benjamin F, Alkharouf, Nadim W
Published 2012

RKN Lethal DB: A database for the identification of Root Knot Nematode (Meloidogyne spp.) candidate lethal genes

by Ismail, Ahmed, Matthews, Benjamin F, Alkharouf, Nadim W
Published 2012

SoyProLow: A protein database enriched in low abundant soybean proteins

by Tavakolan, Mona, Alkharouf, Nadim W, Matthews, Benjamin F, Natarajan, Savithiry S
Published 2014

SCNProDB: A database for the identification of soybean cyst nematode proteins

by Natarajan, Savithiry, Tavakolan, Mona, Alkharouf, Nadim W, Matthews, Benjamin F
Published 2014

BBGD: an online database for blueberry genomic data

by Alkharouf, Nadim W, Dhanaraj, Anik L, Naik, Dhananjay, Overall, Chris, Matthews, Benjamin F, Rowland, Lisa J
Published 2007

Analysis of Phakopsora pachyrhizi transcript abundance in critical pathways at four time-points during infection of a susceptible soybean cultivar using deep sequencing

by Tremblay, Arianne, Hosseini, Parsa, Li, Shuxian, Alkharouf, Nadim W, Matthews, Benjamin F
Published 2013

Arabidopsis genes, AtNPR1, AtTGA2 and AtPR-5, confer partial resistance to soybean cyst nematode (Heterodera glycines) when overexpressed in transgenic soybean roots

by Matthews, Benjamin F, Beard, Hunter, Brewer, Eric, Kabir, Sara, MacDonald, Margaret H, Youssef, Reham M
Published 2014

A decline in transcript abundance for Heterodera glycines homologs of Caenorhabditis elegans uncoordinated genes accompanies its sedentary parasitic phase

by Klink, Vincent P, Martins, Veronica E, Alkharouf, Nadim W, Overall, Christopher C, MacDonald, Margaret H, Matthews, Benjamin F
Published 2007

Ectopic expression of AtPAD4 broadens resistance of soybean to soybean cyst and root-knot nematodes

by Youssef, Reham M, MacDonald, Margaret H, Brewer, Eric P, Bauchan, Gary R, Kim, Kyung-Hwan, Matthews, Benjamin F
Published 2013

Engineered resistance and hypersusceptibility through functional metabolic studies of 100 genes in soybean to its major pathogen, the soybean cyst nematode

by Matthews, Benjamin F., Beard, Hunter, MacDonald, Margaret H., Kabir, Sara, Youssef, Reham M., Hosseini, Parsa, Brewer, Eric
Published 2013

Analysis of Gene expression in soybean (Glycine max) roots in response to the root knot nematode Meloidogyne incognita using microarrays and KEGG pathways

by Ibrahim, Heba MM, Hosseini, Parsa, Alkharouf, Nadim W, Hussein, Ebtissam HA, Gamal El-Din, Abd El Kader Y, Aly, Mohammed AM, Matthews, Benjamin F
Published 2011