Mouse obesity network reconstruction with a variational Bayes algorithm to employ aggressive false positive control

by Logsdon, Benjamin A, Hoffman, Gabriel E, Mezey, Jason G
Published 2012

PUMA: A Unified Framework for Penalized Multiple Regression Analysis of GWAS Data

by Hoffman, Gabriel E., Logsdon, Benjamin A., Mezey, Jason G.
Published 2013

Identifying Network Perturbation in Cancer

by Grechkin, Maxim, Logsdon, Benjamin A., Gentles, Andrew J., Lee, Su-In
Published 2016

SPINE: SParse eIgengene NEtwork Linking Gene Expression Clusters in Dehalococcoides mccartyi to Perturbations in Experimental Conditions

by Mansfeldt, Cresten B., Logsdon, Benjamin A., Debs, Garrett E., Richardson, Ruth E.
Published 2015

Sparse expression bases in cancer reveal tumor drivers

by Logsdon, Benjamin A., Gentles, Andrew J., Miller, Chris P., Blau, C. Anthony, Becker, Pamela S., Lee, Su-In
Published 2015

Extracting a low-dimensional description of multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer

by Celik, Safiye, Logsdon, Benjamin A., Battle, Stephanie, Drescher, Charles W., Rendi, Mara, Hawkins, R. David, Lee, Su-In
Published 2016

A Meta-Analysis and Genome-Wide Association Study of Platelet Count and Mean Platelet Volume in African Americans

by Qayyum, Rehan, Snively, Beverly M., Ziv, Elad, Nalls, Michael A., Liu, Yongmei, Tang, Weihong, Yanek, Lisa R., Lange, Leslie, Evans, Michele K., Ganesh, Santhi, Austin, Melissa A., Lettre, Guillaume, Becker, Diane M., Zonderman, Alan B., Singleton, Andrew B., Harris, Tamara B., Mohler, Emile R., Logsdon, Benjamin A., Kooperberg, Charles, Folsom, Aaron R., Wilson, James G., Becker, Lewis C., Reiner, Alexander P.
Published 2012

Improving Breast Cancer Survival Analysis through Competition-Based Multidimensional Modeling

by Bilal, Erhan, Dutkowski, Janusz, Guinney, Justin, Jang, In Sock, Logsdon, Benjamin A., Pandey, Gaurav, Sauerwine, Benjamin A., Shimoni, Yishai, Moen Vollan, Hans Kristian, Mecham, Brigham H., Rueda, Oscar M., Tost, Jorg, Curtis, Christina, Alvarez, Mariano J., Kristensen, Vessela N., Aparicio, Samuel, Børresen-Dale, Anne-Lise, Caldas, Carlos, Califano, Andrea, Friend, Stephen H., Ideker, Trey, Schadt, Eric E., Stolovitzky, Gustavo A., Margolin, Adam A.
Published 2013

Gene Expression Elucidates Functional Impact of Polygenic Risk for Schizophrenia

by Fromer, Menachem, Roussos, Panos, Sieberts, Solveig K, Johnson, Jessica S, Kavanagh, David H, Perumal, Thanneer M, Ruderfer, Douglas M, Oh, Edwin C, Topol, Aaron, Shah, Hardik R, Klei, Lambertus L, Kramer, Robin, Pinto, Dalila, Gümüş, Zeynep H, Cicek, A. Ercument, Dang, Kristen K, Browne, Andrew, Lu, Cong, Xie, Lu, Readhead, Ben, Stahl, Eli A, Parvizi, Mahsa, Hamamsy, Tymor, Fullard, John F, Wang, Ying-Chih, Mahajan, Milind C, Derry, Jonathan M J, Dudley, Joel, Hemby, Scott E, Logsdon, Benjamin A, Talbot, Konrad, Raj, Towfique, Bennett, David A, De Jager, Philip L, Zhu, Jun, Zhang, Bin, Sullivan, Patrick F, Chess, Andrew, Purcell, Shaun M, Shinobu, Leslie A, Mangravite, Lara M, Toyoshiba, Hiroyoshi, Gur, Raquel E, Hahn, Chang-Gyu, Lewis, David A, Haroutunian, Vahram, Peters, Mette A, Lipska, Barbara K, Buxbaum, Joseph D, Schadt, Eric E, Hirai, Keisuke, Roeder, Kathryn, Brennand, Kristen J, Katsanis, Nicholas, Domenici, Enrico, Devlin, Bernie, Sklar, Pamela
Published 2016