Reverse Engineering of Genome-wide Gene Regulatory Networks from Gene Expression Data

by Liu, Zhi-Ping
Published 2015

Identification of dysfunctional modules and disease genes in congenital heart disease by a network-based approach

by He, Danning, Liu, Zhi-Ping, Chen, Luonan
Published 2011

Modeling Genome-Wide Dynamic Regulatory Network in Mouse Lungs with Influenza Infection Using High-Dimensional Ordinary Differential Equations

by Wu, Shuang, Liu, Zhi-Ping, Qiu, Xing, Wu, Hulin
Published 2014

RegNetwork: an integrated database of transcriptional and post-transcriptional regulatory networks in human and mouse

by Liu, Zhi-Ping, Wu, Canglin, Miao, Hongyu, Wu, Hulin
Published 2015

Systematic identification of transcriptional and post-transcriptional regulations in human respiratory epithelial cells during influenza A virus infection

by Liu, Zhi-Ping, Wu, Hulin, Zhu, Jian, Miao, Hongyu
Published 2014

Identifying module biomarker in type 2 diabetes mellitus by discriminative area of functional activity

by Zhang, Xindong, Gao, Lin, Liu, Zhi-Ping, Chen, Luonan
Published 2015

Predicting gene ontology functions from protein's regional surface structures

by Liu, Zhi-Ping, Wu, Ling-Yun, Wang, Yong, Chen, Luonan, Zhang, Xiang-Sun
Published 2007

Network screening of Goto-Kakizaki rat liver microarray data during diabetic progression

by Zhou, Huarong, Saito, Shigeru, Piao, Guanying, Liu, Zhi-Ping, Wang, Jiguang, Horimoto, Katsuhisa, Chen, Luonan
Published 2011

Detecting early-warning signals for sudden deterioration of complex diseases by dynamical network biomarkers

by Chen, Luonan, Liu, Rui, Liu, Zhi-Ping, Li, Meiyi, Aihara, Kazuyuki
Published 2012

Identifying Responsive Modules by Mathematical Programming: An Application to Budding Yeast Cell Cycle

by Wen, Zhenshu, Liu, Zhi-Ping, Yan, Yiqing, Piao, Guanying, Liu, Zhengrong, Wu, Jiarui, Chen, Luonan
Published 2012

Identifying critical transitions and their leading biomolecular networks in complex diseases

by Liu, Rui, Li, Meiyi, Liu, Zhi-Ping, Wu, Jiarui, Chen, Luonan, Aihara, Kazuyuki
Published 2012

Spatio-temporal analysis of type 2 diabetes mellitus based on differential expression networks

by Sun, Shao-Yan, Liu, Zhi-Ping, Zeng, Tao, Wang, Yong, Chen, Luonan
Published 2013

Identifying dysregulated pathways in cancers from pathway interaction networks

by Liu, Ke-Qin, Liu, Zhi-Ping, Hao, Jin-Kao, Chen, Luonan, Zhao, Xing-Ming
Published 2012

Uncovering Driver DNA Methylation Events in Nonsmoking Early Stage Lung Adenocarcinoma

by Zhang, Xindong, Gao, Lin, Liu, Zhi-Ping, Jia, Songwei, Chen, Luonan
Published 2016

NOA: a novel Network Ontology Analysis method

by Wang, Jiguang, Huang, Qiang, Liu, Zhi-Ping, Wang, Yong, Wu, Ling-Yun, Chen, Luonan, Zhang, Xiang-Sun
Published 2011

Inferring a protein interaction map of Mycobacterium tuberculosis based on sequences and interologs

by Liu, Zhi-Ping, Wang, Jiguang, Qiu, Yu-Qing, Leung, Ross KK, Zhang, Xiang-Sun, Tsui, Stephen KW, Chen, Luonan
Published 2012

A computational procedure for identifying master regulator candidates: a case study on diabetes progression in Goto-Kakizaki rats

by Piao, Guanying, Saito, Shigeru, Sun, Yidan, Liu, Zhi-Ping, Wang, Yong, Han, Xiao, Wu, Jiarui, Zhou, Huarong, Chen, Luonan, Horimoto, Katsuhisa
Published 2012

Diversity in Compartmental Dynamics of Gene Regulatory Networks: The Immune Response in Primary Influenza A Infection in Mice

by Qiu, Xing, Wu, Shuang, Hilchey, Shannon P., Thakar, Juilee, Liu, Zhi-Ping, Welle, Stephen L., Henn, Alicia D., Wu, Hulin, Zand, Martin S.
Published 2015