Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen)

by Rambaut, Andrew, Lam, Tommy T., Max Carvalho, Luiz, Pybus, Oliver G.
Published 2016

Puzzling origins of the Ebola outbreak in the Democratic Republic of the Congo, 2014

by Lam, Tommy Tsan Yuk, Zhu, Huachen, Chong, Yeeling, Holmes, Edward C., Guan, Yi
Published 2015

Spatial Dynamics of Human-Origin H1 Influenza A Virus in North American Swine

by Nelson, Martha I., Lemey, Philippe, Tan, Yi, Vincent, Amy, Lam, Tommy Tsan-Yuk, Detmer, Susan, Viboud, Cécile, Suchard, Marc A., Rambaut, Andrew, Holmes, Edward C., Gramer, Marie
Published 2011

Full-Genome Deep Sequencing and Phylogenetic Analysis of Novel Human Betacoronavirus

by Cotten, Matthew, Lam, Tommy T., Watson, Simon J., Palser, Anne L., Petrova, Velislava, Grant, Paul, Pybus, Oliver G., Rambaut, Andrew, Guan, Yi, Pillay, Deenan, Kellam, Paul, Nastouli, Eleni
Published 2013

Comparison of Mutation Patterns in Full-Genome A/H3N2 Influenza Sequences Obtained Directly from Clinical Samples and the Same Samples after a Single MDCK Passage

by Lee, Hong Kai, Tang, Julian Wei-Tze, Kong, Debra Han-Lin, Loh, Tze Ping, Chiang, Donald Kok-Leong, Lam, Tommy Tsan-Yuk, Koay, Evelyn Siew-Chuan
Published 2013

The rapidly expanding CRF01_AE epidemic in China is driven by multiple lineages of HIV-1 viruses introduced in the 1990s

by Feng, Yi, He, Xiang, Hsi, Jenny H., Li, Fan, Li, Xingguang, Wang, Quan, Ruan, Yuhua, Xing, Hui, Lam, Tommy Tsan-Yuk, Pybus, Oliver G., Takebe, Yutaka, Shao, Yiming
Published 2013

Epidemiological and Evolutionary Dynamics of Influenza B Viruses in Malaysia, 2012-2014

by Oong, Xiang Yong, Ng, Kim Tien, Lam, Tommy Tsan-Yuk, Pang, Yong Kek, Chan, Kok Gan, Hanafi, Nik Sherina, Kamarulzaman, Adeeba, Tee, Kok Keng
Published 2015

Evolutionary and molecular analysis of the emergent severe fever with thrombocytopenia syndrome virus

by Lam, Tommy Tsan-Yuk, Liu, Wei, Bowden, Thomas A., Cui, Ning, Zhuang, Lu, Liu, Kun, Zhang, Yao-Yun, Cao, Wu-Chun, Pybus, Oliver G.
Published 2013

Migration and Persistence of Human Influenza A Viruses, Vietnam, 2001–2008

by Le, Mai Quynh, Lam, Ha Minh, Cuong, Vuong Duc, Lam, Tommy Tsan-Yuk, Halpin, Rebecca A, Wentworth, David E, Hien, Nguyen Tran, Thanh, Le Thi, Phuong, Hoang Vu Mai, Horby, Peter, Boni, Maciej F.
Published 2013

Molecular Characterization of the Fecal Microbiota in Patients with Nonalcoholic Steatohepatitis – A Longitudinal Study

by Wong, Vincent Wai-Sun, Tse, Chi-Hang, Lam, Tommy Tsan-Yuk, Wong, Grace Lai-Hung, Chim, Angel Mei-Ling, Chu, Winnie Chiu-Wing, Yeung, David Ka-Wai, Law, Patrick Tik-Wan, Kwan, Hoi-Shan, Yu, Jun, Sung, Joseph Jao-Yiu, Chan, Henry Lik-Yuen
Published 2013

Opioids for chronic non-cancer pain: a protocol for a systematic review of randomized controlled trials

by Busse, Jason W, Schandelmaier, Stefan, Kamaleldin, Mostafa, Hsu, Sandy, Riva, John J, Vandvik, Per Olav, Tsoi, Ludwig, Lam, Tommy, Ebrahim, Shanil, Johnston, Bradley, Oliveri, Lori, Montoya, Luis, Kunz, Regina, Malandrino, Anna, Bhatnagar, Neera, Mulla, Sohail M, Lopes, Luciane C, Soobiah, Charlene, Wong, Anthony, Buckley, Norman, Sessler, Daniel, Guyatt, Gordon H
Published 2013

The genesis and source of the H7N9 influenza viruses causing human infections in China

by Lam, Tommy Tsan-Yuk, Wang, Jia, Shen, Yongyi, Zhou, Boping, Duan, Lian, Cheung, Chung-Lam, Ma, Chi, Lycett, Samantha J., Leung, Connie Yin-Hung, Chen, Xinchun, Li, Lifeng, Hong, Wenshan, Chai, Yujuan, Zhou, Linlin, Liang, Huyi, Ou, Zhihua, Liu, Yongmei, Farooqui, Amber, Kelvin, David J., Poon, Leo L.M., Smith, David K., Pybus, Oliver G., Leung, Gabriel M., Shu, Yuelong, Webster, Robert G., Webby, Richard J., Peiris, Joseph S.M., Rambaut, Andrew, Zhu, Huachen, Guan, Yi
Published 2013

Molecular Epidemiology and Evolution of Influenza Viruses Circulating within European Swine between 2009 and 2013

by Watson, Simon J., Langat, Pinky, Reid, Scott M., Lam, Tommy Tsan-Yuk, Cotten, Matthew, Kelly, Michael, Van Reeth, Kristien, Qiu, Yu, Simon, Gaëlle, Bonin, Emilie, Foni, Emanuela, Chiapponi, Chiara, Larsen, Lars, Hjulsager, Charlotte, Markowska-Daniel, Iwona, Urbaniak, Kinga, Dürrwald, Ralf, Schlegel, Michael, Huovilainen, Anita, Davidson, Irit, Dán, Ádám, Loeffen, Willie, Edwards, Stephanie, Bublot, Michel, Vila, Thais, Maldonado, Jaime, Valls, Laura, Brown, Ian H., Pybus, Oliver G., Kellam, Paul
Published 2015