Propensity Score Method for Partially Matched Omics Studies

by Kuan, Pei-Fen
Published 2014

Multivariate Boosting for Integrative Analysis of High-Dimensional Cancer Genomic Data

by Xiong, Lie, Kuan, Pei-Fen, Tian, Jianan, Keles, Sunduz, Wang, Sijian
Published 2015

Discovering Transcription Factor Binding Sites in Highly Repetitive Regions of Genomes with Multi-Read Analysis of ChIP-Seq Data

by Chung, Dongjun, Kuan, Pei Fen, Li, Bo, Sanalkumar, Rajendran, Liang, Kun, Bresnick, Emery H., Dewey, Colin, Keleş, Sündüz
Published 2011

The Cavβ1a subunit regulates gene expression and suppresses myogenin in muscle progenitor cells

by Taylor, Jackson, Pereyra, Andrea, Zhang, Tan, Messi, Maria Laura, Wang, Zhong-Min, Hereñú, Claudia, Kuan, Pei-Fen, Delbono, Osvaldo
Published 2014

DNA methylation profiling in the Carolina Breast Cancer Study defines cancer subclasses differing in clinicopathologic characteristics and survival

by Conway, Kathleen, Edmiston, Sharon N, May, Ryan, Kuan, Pei Fen, Chu, Haitao, Bryant, Christopher, Tse, Chiu-Kit, Swift-Scanlan, Theresa, Geradts, Joseph, Troester, Melissa A, Millikan, Robert C
Published 2014

Metabolomic Profiling Reveals Mitochondrial-Derived Lipid Biomarkers That Drive Obesity-Associated Inflammation

by Sampey, Brante P., Freemerman, Alex J., Zhang, Jimmy, Kuan, Pei-Fen, Galanko, Joseph A., O'Connell, Thomas M., Ilkayeva, Olga R., Muehlbauer, Michael J., Stevens, Robert D., Newgard, Christopher B., Brauer, Heather A., Troester, Melissa A., Makowski, Liza
Published 2012

DNA-methylation profiling distinguishes malignant melanomas from benign nevi

by Conway, Kathleen, Edmiston, Sharon N, Khondker, Zakaria S, Groben, Pamela A, Zhou, Xin, Chu, Haitao, Kuan, Pei Fen, Hao, Honglin, Carson, Craig, Berwick, Marianne, Olilla, David W, Thomas, Nancy E
Published 2011

Epstein-barr virus infected gastric adenocarcinoma expresses latent and lytic viral transcripts and has a distinct human gene expression profile

by Tang, Weihua, Morgan, Douglas R, Meyers, Michael O, Dominguez, Ricardo L, Martinez, Enrique, Kakudo, Kennichi, Kuan, Pei Fen, Banet, Natalie, Muallem, Hind, Woodward, Kimberly, Speck, Olga, Gulley, Margaret L
Published 2012

Application of Multiplexed Kinase Inhibitor Beads to Study Kinome Adaptations in Drug-Resistant Leukemia

by Cooper, Matthew J., Cox, Nathan J., Zimmerman, Eric I., Dewar, Brian J., Duncan, James S., Whittle, Martin C., Nguyen, Thien A., Jones, Lauren S., Ghose Roy, Sreerupa, Smalley, David M., Kuan, Pei Fen, Richards, Kristy L., Christopherson, Richard I., Jin, Jian, Frye, Stephen V., Johnson, Gary L., Baldwin, Albert S., Graves, Lee M.
Published 2013

DiffSplice: the genome-wide detection of differential splicing events with RNA-seq

by Hu, Yin, Huang, Yan, Du, Ying, Orellana, Christian F., Singh, Darshan, Johnson, Amy R., Monroy, Anaïs, Kuan, Pei-Fen, Hammond, Scott M., Makowski, Liza, Randell, Scott H., Chiang, Derek Y., Hayes, D. Neil, Jones, Corbin, Liu, Yufeng, Prins, Jan F., Liu, Jinze
Published 2013

Mutations in Isocitrate Dehydrogenase 1 and 2 Occur Frequently in Intrahepatic Cholangiocarcinomas and Share Hypermethylation Targets with Glioblastomas

by Wang, Pu, Dong, Qiongzhu, Zhang, Chong, Kuan, Pei-Fen, Liu, Yufeng, Jeck, William R., Andersen, Jesper B., Jiang, Wenqing, Savich, Gleb L., Tan, Ting-Xu, Auman, J. Todd, Hoskins, Janelle M., Misher, Anne D., Moser, Catherine D., Yourstone, Scott M., Kim, Jin Woo, Cibulskis, Kristian, Getz, Gad, Hunt, Heike V., Thorgeirsson, Snorri S., Roberts, Lewis R., Ye, Dan, Guan, Kun-Liang, Xiong, Yue, Qin, Lun-Xiu, Chiang, Derek Y.
Published 2012