groHMM: a computational tool for identifying unannotated and cell type-specific transcription units from global run-on sequencing data

by Chae, Minho, Danko, Charles G., Kraus, W. Lee
Published 2015

New Facets in the Regulation of Gene Expression by ADP-Ribosylation and Poly(ADP-ribose) Polymerases

by Ryu, Keun Woo, Kim, Dae-Seok, Kraus, W. Lee
Published 2015

Mapping ERβ Genomic Binding Sites Reveals Unique Genomic Features and Identifies EBF1 as an ERβ Interactor

by Le, Thien P., Sun, Miao, Luo, Xin, Kraus, W. Lee, Greene, Geoffrey L.
Published 2013

Dynamic reorganization of the AC16 cardiomyocyte transcriptome in response to TNFα signaling revealed by integrated genomic analyses

by Luo, Xin, Chae, Minho, Krishnakumar, Raga, Danko, Charles G, Kraus, W Lee
Published 2014

Genome-Wide Analysis Reveals PADI4 Cooperates with Elk-1 to Activate c-Fos Expression in Breast Cancer Cells

by Zhang, Xuesen, Gamble, Matthew J., Stadler, Sonja, Cherrington, Brian D., Causey, Corey P., Thompson, Paul R., Roberson, Mark S., Kraus, W. Lee, Coonrod, Scott A.
Published 2011

Identification of active transcriptional regulatory elements with GRO-seq

by Danko, Charles G., Hyland, Stephanie L., Core, Leighton J., Martins, Andre L., Waters, Colin T, Lee, Hyung Won, Cheung, Vivian G., Kraus, W. Lee, Lis, John T., Siepel, Adam
Published 2015

Global analysis of p53-regulated transcription identifies its direct targets and unexpected regulatory mechanisms

by Allen, Mary Ann, Andrysik, Zdenek, Dengler, Veronica L, Mellert, Hestia S, Guarnieri, Anna, Freeman, Justin A, Sullivan, Kelly D, Galbraith, Matthew D, Luo, Xin, Kraus, W Lee, Dowell, Robin D, Espinosa, Joaquin M
Published 2014

SMARCAD1 is an ATP-dependent stimulator of nucleosomal H2A acetylation via CBP, resulting in transcriptional regulation

by Doiguchi, Masamichi, Nakagawa, Takeya, Imamura, Yuko, Yoneda, Mitsuhiro, Higashi, Miki, Kubota, Kazuishi, Yamashita, Satoshi, Asahara, Hiroshi, Iida, Midori, Fujii, Satoshi, Ikura, Tsuyoshi, Liu, Ziying, Nandu, Tulip, Kraus, W. Lee, Ueda, Hitoshi, Ito, Takashi
Published 2016