Detection of mitochondrial insertions in the nucleus (NuMts) of Pleistocene and modern muskoxen

by Kolokotronis, Sergios-Orestis, MacPhee, Ross DE, Greenwood, Alex D
Published 2007

Random Addition Concatenation Analysis: A Novel Approach to the Exploration of Phylogenomic Signal Reveals Strong Agreement between Core and Shell Genomic Partitions in the Cyanoba...

by Narechania, Apurva, Baker, Richard H., Sit, Ryan, Kolokotronis, Sergios-Orestis, DeSalle, Rob, Planet, Paul J.
Published 2012

Testing the Effectiveness of an International Conservation Agreement: Marketplace Forensics and CITES Caviar Trade Regulation

by Doukakis, Phaedra, Pikitch, Ellen K., Rothschild, Anna, DeSalle, Rob, Amato, George, Kolokotronis, Sergios-Orestis
Published 2012

In the Wake of Invasion: Tracing the Historical Biogeography of the South American Cricetid Radiation (Rodentia, Sigmodontinae)

by Leite, Rafael N., Kolokotronis, Sergios-Orestis, Almeida, Francisca C., Werneck, Fernanda P., Rogers, Duke S., Weksler, Marcelo
Published 2014

Mycobacterial Phylogenomics: An Enhanced Method for Gene Turnover Analysis Reveals Uneven Levels of Gene Gain and Loss among Species and Gene Families

by Librado, Pablo, Vieira, Filipe G., Sánchez-Gracia, Alejandro, Kolokotronis, Sergios-Orestis, Rozas, Julio
Published 2014

To beat or not to beat a tick: comparison of DNA extraction methods for ticks (Ixodes scapularis)

by Ammazzalorso, Alyssa D., Zolnik, Christine P., Daniels, Thomas J., Kolokotronis, Sergios-Orestis
Published 2015

Combining genetic and distributional approaches to sourcing introduced species: a case study on the Nile monitor (Varanus niloticus) in Florida

by Dowell, Stephanie A., Wood, Jared P., Campbell, Todd S., Kolokotronis, Sergios-Orestis, Hekkala, Evon R.
Published 2016

No Observed Effect of Landscape Fragmentation on Pathogen Infection Prevalence in Blacklegged Ticks (Ixodes scapularis) in the Northeastern United States

by Zolnik, Christine P., Falco, Richard C., Kolokotronis, Sergios-Orestis, Daniels, Thomas J.
Published 2015

Fine-scale genetic analysis of the exploited Nile monitor (Varanus niloticus) in Sahelian Africa

by Dowell, Stephanie A, de Buffrénil, Vivian, Kolokotronis, Sergios-Orestis, Hekkala, Evon R
Published 2015

Molecular Surveillance of Low Pathogenic Avian Influenza Viruses in Wild Birds across the United States: Inferences from the Hemagglutinin Gene

by Piaggio, Antoinette J., Shriner, Susan A., VanDalen, Kaci K., Franklin, Alan B., Anderson, Theodore D., Kolokotronis, Sergios-Orestis
Published 2012

Evolutionary Analyses and Natural Selection of Betaine-Homocysteine S-Methyltransferase (BHMT) and BHMT2 Genes

by Ganu, Radhika S., Ishida, Yasuko, Koutmos, Markos, Kolokotronis, Sergios-Orestis, Roca, Alfred L., Garrow, Timothy A., Schook, Lawrence B.
Published 2015

Clusterflock: a flocking algorithm for isolating congruent phylogenomic datasets

by Narechania, Apurva, Baker, Richard, DeSalle, Rob, Mathema, Barun, Kolokotronis, Sergios-Orestis, Kreiswirth, Barry, Planet, Paul J.
Published 2016

Reconciling Apparent Conflicts between Mitochondrial and Nuclear Phylogenies in African Elephants

by Ishida, Yasuko, Oleksyk, Taras K., Georgiadis, Nicholas J., David, Victor A., Zhao, Kai, Stephens, Robert M., Kolokotronis, Sergios-Orestis, Roca, Alfred L.
Published 2011

Biogeography and taxonomy of extinct and endangered monk seals illuminated by ancient DNA and skull morphology

by Scheel, Dirk-Martin, Slater, Graham J., Kolokotronis, Sergios-Orestis, Potter, Charles W., Rotstein, David S., Tsangaras, Kyriakos, Greenwood, Alex D., Helgen, Kristofer M.
Published 2014

Bats, Primates, and the Evolutionary Origins and Diversification of Mammalian Gammaherpesviruses

by Escalera-Zamudio, Marina, Rojas-Anaya, Edith, Kolokotronis, Sergios-Orestis, Taboada, Blanca, Loza-Rubio, Elizabeth, Méndez-Ojeda, Maria L., Arias, Carlos F., Osterrieder, Nikolaus, Greenwood, Alex D.
Published 2016

Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York city and New Jersey, 1999–2009

by Brown, Tyler S., Narechania, Apurva, Walker, John R., Planet, Paul J., Bifani, Pablo J., Kolokotronis, Sergios-Orestis, Kreiswirth, Barry N., Mathema, Barun
Published 2016

A Functional Phylogenomic View of the Seed Plants

by Lee, Ernest K., Cibrian-Jaramillo, Angelica, Kolokotronis, Sergios-Orestis, Katari, Manpreet S., Stamatakis, Alexandros, Ott, Michael, Chiu, Joanna C., Little, Damon P., Stevenson, Dennis Wm., McCombie, W. Richard, Martienssen, Robert A., Coruzzi, Gloria, DeSalle, Rob
Published 2011

Emergence of the Epidemic Methicillin-Resistant Staphylococcus aureus Strain USA300 Coincides with Horizontal Transfer of the Arginine Catabolic Mobile Element and speG-mediated Ad...

by Planet, Paul J., LaRussa, Samuel J., Dana, Ali, Smith, Hannah, Xu, Amy, Ryan, Chanelle, Uhlemann, Anne-Catrin, Boundy, Sam, Goldberg, Julia, Narechania, Apurva, Kulkarni, Ritwij, Ratner, Adam J., Geoghegan, Joan A., Kolokotronis, Sergios-Orestis, Prince, Alice
Published 2013

Zoonotic Viruses Associated with Illegally Imported Wildlife Products

by Smith, Kristine M., Anthony, Simon J., Switzer, William M., Epstein, Jonathan H., Seimon, Tracie, Jia, Hongwei, Sanchez, Maria D., Huynh, Thanh Thao, Galland, G. Gale, Shapiro, Sheryl E., Sleeman, Jonathan M., McAloose, Denise, Stuchin, Margot, Amato, George, Kolokotronis, Sergios-Orestis, Lipkin, W. Ian, Karesh, William B., Daszak, Peter, Marano, Nina
Published 2012

Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius

by Rosenfeld, Jeffrey A., Reeves, Darryl, Brugler, Mercer R., Narechania, Apurva, Simon, Sabrina, Durrett, Russell, Foox, Jonathan, Shianna, Kevin, Schatz, Michael C., Gandara, Jorge, Afshinnekoo, Ebrahim, Lam, Ernest T., Hastie, Alex R., Chan, Saki, Cao, Han, Saghbini, Michael, Kentsis, Alex, Planet, Paul J., Kholodovych, Vladyslav, Tessler, Michael, Baker, Richard, DeSalle, Rob, Sorkin, Louis N., Kolokotronis, Sergios-Orestis, Siddall, Mark E., Amato, George, Mason, Christopher E.
Published 2016