Skip the Alignment: Degenerate, Multiplex Primer and Probe Design Using K-mer Matching Instead of Alignments

by Hysom, David A., Naraghi-Arani, Pejman, Elsheikh, Maher, Carrillo, A. Celena, Williams, Peter L., Gardner, Shea N.
Published 2012

Scalable metagenomic taxonomy classification using a reference genome database

by Ames, Sasha K., Hysom, David A., Gardner, Shea N., Lloyd, G. Scott, Gokhale, Maya B., Allen, Jonathan E.
Published 2013

Multiplex Degenerate Primer Design for Targeted Whole Genome Amplification of Many Viral Genomes

by Gardner, Shea N., Jaing, Crystal J., Elsheikh, Maher M., Peña, José, Hysom, David A., Borucki, Monica K.
Published 2014